Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03676

Experiment: PYE with Gentamicin 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Gentamicin 0.0005 mg/ml
3,835,139	+		CCNA_03675	0.46	+0.2
3,835,140	+		CCNA_03675	0.46	+0.4
3,835,174	+		CCNA_03675	0.48	-1.0
3,835,178	-		CCNA_03675	0.48	-0.2
3,835,180	+		CCNA_03675	0.48	+0.6
3,835,182	-		CCNA_03675	0.48	-2.4
3,835,217	+		CCNA_03675	0.50	+1.5
3,835,222	-		CCNA_03675	0.50	-1.2
3,835,236	+		CCNA_03675	0.51	-1.3
3,835,236	+		CCNA_03675	0.51	+0.4
3,835,247	+		CCNA_03675	0.52	-1.2
3,835,268	+		CCNA_03675	0.53	-2.1
3,835,287	-		CCNA_03675	0.54	-0.5
3,835,334	-		CCNA_03675	0.56	-1.1
3,835,334	-		CCNA_03675	0.56	-0.5
3,835,340	+		CCNA_03675	0.57	-0.9
3,835,371	+		CCNA_03675	0.58	+0.8
3,835,371	+		CCNA_03675	0.58	+0.1
3,835,376	+		CCNA_03675	0.59	-2.3
3,835,379	-		CCNA_03675	0.59	-1.8
3,835,379	-		CCNA_03675	0.59	-2.4
3,835,436	-		CCNA_03675	0.62	+0.3
3,835,447	+				+1.3
3,835,449	+		CCNA_03675	0.63	-0.1
3,835,462	-		CCNA_03675	0.63	+0.3
3,835,463	-		CCNA_03675	0.63	-1.7
3,835,480	+		CCNA_03675	0.64	+0.1
3,835,487	-		CCNA_03675	0.65	-1.8
3,835,489	+		CCNA_03675	0.65	+1.6
3,835,498	+		CCNA_03675	0.65	+1.6
3,835,498	-		CCNA_03675	0.65	-1.2
3,835,525	+		CCNA_03675	0.67	+1.8
3,835,532	-		CCNA_03675	0.67	+0.8
3,835,553	+		CCNA_03675	0.68	+0.3
3,835,589	-		CCNA_03675	0.70	-1.3
3,835,591	+		CCNA_03675	0.70	+0.1
3,835,594	-		CCNA_03675	0.71	+2.0
3,835,597	+		CCNA_03675	0.71	-0.4
3,835,623	-		CCNA_03675	0.72	+0.7
3,835,626	-		CCNA_03675	0.72	-0.2
3,835,666	+		CCNA_03675	0.74	+0.4
3,835,684	-		CCNA_03675	0.75	-1.2
3,835,698	-		CCNA_03675	0.76	-0.9
3,835,714	+		CCNA_03675	0.77	+1.0
3,835,722	-		CCNA_03675	0.78	-1.3
3,835,722	-		CCNA_03675	0.78	+0.8
3,835,722	-		CCNA_03675	0.78	+0.0
3,835,847	+		CCNA_03675	0.84	-1.6
3,835,847	+		CCNA_03675	0.84	-1.2
3,835,847	+		CCNA_03675	0.84	-1.4
3,835,855	-		CCNA_03675	0.85	-1.1
3,835,863	+		CCNA_03675	0.85	-0.9
3,835,871	-		CCNA_03675	0.86	-1.2
3,835,939	+		CCNA_03675	0.89	+0.6
3,835,947	-		CCNA_03675	0.90	+0.3
3,835,949	+		CCNA_03675	0.90	-1.8
3,835,971	-				-3.3
3,836,042	+				-0.2
3,836,077	+				+1.1
3,836,179	-		CCNA_03676	0.11	-0.1
3,836,190	+		CCNA_03676	0.13	-1.2
3,836,198	-		CCNA_03676	0.15	-0.5
3,836,209	+		CCNA_03676	0.18	-0.8
3,836,217	-		CCNA_03676	0.19	-2.8
3,836,217	-		CCNA_03676	0.19	-1.1
3,836,317	+		CCNA_03676	0.42	-1.6
3,836,325	-		CCNA_03676	0.44	-0.2
3,836,341	+		CCNA_03676	0.47	+1.1
3,836,397	+		CCNA_03676	0.60	-2.3
3,836,405	-		CCNA_03676	0.62	+0.8
3,836,460	-				+1.6
3,836,462	+		CCNA_03676	0.75	-1.6
3,836,465	-		CCNA_03676	0.75	+1.1
3,836,475	-		CCNA_03676	0.77	-0.7
3,836,510	+		CCNA_03676	0.85	-0.7
3,836,510	+		CCNA_03676	0.85	-2.0
3,836,510	+		CCNA_03676	0.85	-1.3
3,836,518	-		CCNA_03676	0.87	+0.3
3,836,518	-		CCNA_03676	0.87	+1.3
3,836,522	-		CCNA_03676	0.88	-1.7
3,836,528	+		CCNA_03676	0.89	-2.2
3,836,555	-				+0.8
3,836,568	+				+0.8
3,836,568	+				+0.1
3,836,568	+				+0.0
3,836,586	+				+0.2
3,836,600	+				+0.3
3,836,608	-				-0.6
3,836,608	-				-0.8
3,836,608	-				+0.3
3,836,608	-				-0.4
3,836,608	-				+0.6
3,836,632	-				-1.8
3,836,633	-				+0.6
3,836,668	-				-0.8
3,836,700	+				-0.6
3,836,725	+		CCNA_03677	0.11	-1.1
3,836,787	-		CCNA_03677	0.16	-1.3
3,836,795	+		CCNA_03677	0.16	+0.0
3,836,828	-		CCNA_03677	0.19	+0.6
3,836,833	-		CCNA_03677	0.19	+0.6
3,836,905	-		CCNA_03677	0.25	+0.1
3,836,948	-		CCNA_03677	0.29	+0.0
3,836,948	-		CCNA_03677	0.29	+0.2
3,837,038	-		CCNA_03677	0.36	-0.4
3,837,040	+		CCNA_03677	0.37	-0.0
3,837,084	+		CCNA_03677	0.40	+1.1
3,837,122	-		CCNA_03677	0.43	+0.4
3,837,122	-		CCNA_03677	0.43	+3.6
3,837,153	-		CCNA_03677	0.46	+1.2
3,837,153	-		CCNA_03677	0.46	-0.1
3,837,153	-		CCNA_03677	0.46	-0.2
3,837,188	+		CCNA_03677	0.49	-0.2
3,837,196	-		CCNA_03677	0.49	-0.4
3,837,196	-		CCNA_03677	0.49	-0.5
3,837,203	-		CCNA_03677	0.50	+0.6
3,837,209	+		CCNA_03677	0.50	+0.6
3,837,237	-		CCNA_03677	0.53	+0.1
3,837,247	-		CCNA_03677	0.54	+1.3
3,837,269	+		CCNA_03677	0.55	-0.2
3,837,341	-		CCNA_03677	0.61	-0.1
3,837,368	+		CCNA_03677	0.64	-0.4
3,837,373	+		CCNA_03677	0.64	-0.7
3,837,404	+		CCNA_03677	0.67	-2.1
3,837,417	-		CCNA_03677	0.68	+1.1
3,837,417	-		CCNA_03677	0.68	+1.4
3,837,430	-		CCNA_03677	0.69	-0.4
3,837,444	+		CCNA_03677	0.70	+0.3
3,837,450	+		CCNA_03677	0.70	+0.2
3,837,450	+		CCNA_03677	0.70	-2.2
3,837,452	-		CCNA_03677	0.71	+0.3
3,837,457	-		CCNA_03677	0.71	-0.9
3,837,551	+		CCNA_03677	0.79	+0.9