Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03479

Experiment: PYE with Gentamicin 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Gentamicin 0.0005 mg/ml
3,641,822	-				-1.8
3,641,833	+				+0.6
3,641,846	-		CCNA_03478	0.11	-0.7
3,641,855	+		CCNA_03478	0.12	+0.5
3,641,897	-		CCNA_03478	0.16	+0.9
3,641,904	-		CCNA_03478	0.17	-1.6
3,641,906	-		CCNA_03478	0.17	-1.1
3,641,945	-		CCNA_03478	0.21	+0.2
3,642,018	-		CCNA_03478	0.29	+3.0
3,642,040	+		CCNA_03478	0.31	+0.6
3,642,043	-		CCNA_03478	0.31	-1.9
3,642,069	+		CCNA_03478	0.34	+0.8
3,642,069	+		CCNA_03478	0.34	-0.0
3,642,069	+		CCNA_03478	0.34	+1.8
3,642,069	+		CCNA_03478	0.34	+0.3
3,642,069	+		CCNA_03478	0.34	+0.4
3,642,069	+		CCNA_03478	0.34	+0.3
3,642,069	+		CCNA_03478	0.34	+0.2
3,642,069	+		CCNA_03478	0.34	+1.7
3,642,077	-		CCNA_03478	0.35	-1.4
3,642,077	-		CCNA_03478	0.35	+2.7
3,642,077	-		CCNA_03478	0.35	-1.7
3,642,078	+		CCNA_03478	0.35	+0.5
3,642,088	+		CCNA_03478	0.36	-1.1
3,642,103	+		CCNA_03478	0.37	+0.6
3,642,133	+		CCNA_03478	0.41	+2.1
3,642,180	+		CCNA_03478	0.45	+0.9
3,642,188	-		CCNA_03478	0.46	-1.4
3,642,188	-		CCNA_03478	0.46	-2.4
3,642,188	-				+3.7
3,642,188	-		CCNA_03478	0.46	-1.6
3,642,198	-		CCNA_03478	0.47	+0.2
3,642,198	-		CCNA_03478	0.47	-0.1
3,642,212	+		CCNA_03478	0.49	+0.8
3,642,246	+		CCNA_03478	0.52	+1.0
3,642,246	+		CCNA_03478	0.52	-0.0
3,642,246	+		CCNA_03478	0.52	-0.7
3,642,246	+		CCNA_03478	0.52	+0.9
3,642,246	+		CCNA_03478	0.52	+0.8
3,642,246	+		CCNA_03478	0.52	+0.8
3,642,246	+		CCNA_03478	0.52	+1.4
3,642,251	+		CCNA_03478	0.53	+1.6
3,642,254	-		CCNA_03478	0.53	+0.2
3,642,260	-		CCNA_03478	0.54	+1.4
3,642,274	+		CCNA_03478	0.55	+0.2
3,642,351	-		CCNA_03478	0.63	-0.0
3,642,422	+		CCNA_03478	0.71	+0.7
3,642,498	+		CCNA_03478	0.79	+1.1
3,642,503	+		CCNA_03478	0.79	+0.9
3,642,506	-		CCNA_03478	0.79	-1.4
3,642,545	+		CCNA_03478	0.83	+1.8
3,642,566	+		CCNA_03478	0.86	+1.6
3,642,566	+		CCNA_03478	0.86	+0.4
3,642,568	+		CCNA_03478	0.86	+1.3
3,642,568	+		CCNA_03478	0.86	+0.3
3,642,574	-		CCNA_03478	0.86	+0.2
3,642,576	-		CCNA_03478	0.87	-0.7
3,642,576	-		CCNA_03478	0.87	+0.2
3,642,576	-		CCNA_03478	0.87	-1.5
3,642,578	+		CCNA_03478	0.87	+0.9
3,642,601	+		CCNA_03478	0.89	+0.8
3,642,614	-				+0.1
3,642,624	+				+0.1
3,642,632	-				+2.1
3,642,632	-				+1.1
3,642,655	+				+0.9
3,642,663	-				+0.4
3,642,663	-				-1.9
3,642,686	+				+1.0
3,642,845	+				-1.4
3,642,860	+		CCNA_03479	0.11	-0.2
3,642,933	-		CCNA_03479	0.27	+2.3
3,642,933	-		CCNA_03479	0.27	+2.5
3,642,933	-		CCNA_03479	0.27	+2.4
3,642,948	-		CCNA_03479	0.30	+2.0
3,642,953	-		CCNA_03479	0.32	+2.4
3,642,958	-		CCNA_03479	0.33	+2.6
3,643,007	+		CCNA_03479	0.44	-0.5
3,643,015	-		CCNA_03479	0.45	+2.7
3,643,070	-		CCNA_03479	0.58	+2.2
3,643,084	-		CCNA_03479	0.61	+2.9
3,643,092	-		CCNA_03479	0.63	+2.6
3,643,094	-		CCNA_03479	0.63	+2.2
3,643,112	-		CCNA_03479	0.67	+1.4
3,643,116	-		CCNA_03479	0.68	+2.4
3,643,139	+		CCNA_03479	0.73	+0.4
3,643,147	-		CCNA_03479	0.75	+2.4
3,643,158	+		CCNA_03479	0.77	-2.0
3,643,166	-		CCNA_03479	0.79	+1.4
3,643,233	+				+1.1
3,643,242	-				+1.3
3,643,405	-				-1.7
3,643,455	-		CCNA_03480	0.14	-0.0
3,643,498	+		CCNA_03480	0.19	+0.5
3,643,570	+		CCNA_03480	0.27	+1.4
3,643,577	+		CCNA_03480	0.28	+0.9
3,643,577	+		CCNA_03480	0.28	-0.9
3,643,577	+		CCNA_03480	0.28	-1.6
3,643,622	+		CCNA_03480	0.33	+0.3
3,643,643	-		CCNA_03480	0.36	+0.1
3,643,721	-		CCNA_03480	0.45	+0.0
3,643,723	+		CCNA_03480	0.45	-0.0
3,643,723	+		CCNA_03480	0.45	+1.4
3,643,723	+				+2.1
3,643,731	-		CCNA_03480	0.46	-0.8
3,643,731	-		CCNA_03480	0.46	+0.7
3,643,731	-				+1.1
3,643,731	-		CCNA_03480	0.46	+0.3
3,643,733	+		CCNA_03480	0.46	+0.1
3,643,733	-		CCNA_03480	0.46	-0.6
3,643,736	-		CCNA_03480	0.47	+1.7
3,643,759	+				+1.7
3,643,767	-		CCNA_03480	0.50	-2.1
3,643,804	+		CCNA_03480	0.55	-0.8
3,643,810	-		CCNA_03480	0.55	-1.3
3,643,810	-		CCNA_03480	0.55	-1.3
3,643,810	-		CCNA_03480	0.55	-0.9
3,643,810	-		CCNA_03480	0.55	+0.4
3,643,831	-		CCNA_03480	0.58	-0.6
3,643,898	+		CCNA_03480	0.66	+0.2
3,643,905	+		CCNA_03480	0.66	-0.9
3,643,905	+		CCNA_03480	0.66	+3.0
3,643,905	+		CCNA_03480	0.66	-0.3
3,643,905	-		CCNA_03480	0.66	-0.4
3,643,913	-		CCNA_03480	0.67	-0.5
3,643,913	-		CCNA_03480	0.67	-0.0
3,643,936	-		CCNA_03480	0.70	+0.4
3,643,936	-		CCNA_03480	0.70	+1.2
3,643,936	-		CCNA_03480	0.70	-1.4
3,643,974	+		CCNA_03480	0.75	+0.2
3,643,974	+		CCNA_03480	0.75	+0.4
3,643,982	-		CCNA_03480	0.75	-2.5
3,643,982	-		CCNA_03480	0.75	-0.3
3,643,985	+		CCNA_03480	0.76	-0.6
3,643,992	-		CCNA_03480	0.77	-0.3
3,644,007	-		CCNA_03480	0.78	-1.1
3,644,021	+		CCNA_03480	0.80	-0.1
3,644,021	+		CCNA_03480	0.80	-0.7
3,644,021	+		CCNA_03480	0.80	-1.9
3,644,021	+		CCNA_03480	0.80	+1.5
3,644,021	+		CCNA_03480	0.80	+0.8
3,644,021	+		CCNA_03480	0.80	+0.2
3,644,029	-		CCNA_03480	0.81	-0.8
3,644,029	-		CCNA_03480	0.81	-0.8
3,644,029	-		CCNA_03480	0.81	-0.5
3,644,029	-		CCNA_03480	0.81	+1.6
3,644,031	+		CCNA_03480	0.81	-0.1
3,644,037	+		CCNA_03480	0.82	-0.8
3,644,039	-		CCNA_03480	0.82	-0.3
3,644,092	+		CCNA_03480	0.88	+1.4
3,644,149	+				-0.4
3,644,149	+				-0.4
3,644,149	+				-0.2
3,644,157	-				+0.1
3,644,157	-				+0.9
3,644,157	-				-0.9
3,644,157	-				+0.5
3,644,186	+				+0.6
3,644,186	+				-0.7
3,644,190	+				-1.4
3,644,193	-				-1.0
3,644,219	+				-1.5
3,644,219	+				-1.9
3,644,227	-				-0.1
3,644,246	+				-0.9