Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03129

Experiment: PYE with Gentamicin 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Gentamicin 0.0005 mg/ml
3,276,365	+		CCNA_03128	0.20	+1.0
3,276,373	-		CCNA_03128	0.21	-0.5
3,276,375	-		CCNA_03128	0.21	-0.2
3,276,409	-		CCNA_03128	0.25	+0.5
3,276,432	+		CCNA_03128	0.27	+1.9
3,276,459	+		CCNA_03128	0.30	-1.1
3,276,478	+		CCNA_03128	0.32	-0.3
3,276,501	+		CCNA_03128	0.35	-0.5
3,276,506	-		CCNA_03128	0.35	-1.3
3,276,532	+		CCNA_03128	0.38	+0.6
3,276,533	+		CCNA_03128	0.38	+0.7
3,276,550	+		CCNA_03128	0.40	-0.7
3,276,550	+		CCNA_03128	0.40	-0.6
3,276,599	-		CCNA_03128	0.45	-0.5
3,276,634	+		CCNA_03128	0.49	-0.5
3,276,786	-		CCNA_03128	0.65	-0.7
3,276,793	-		CCNA_03128	0.66	-0.3
3,276,811	+		CCNA_03128	0.68	+1.1
3,276,814	-		CCNA_03128	0.68	-1.0
3,276,817	+		CCNA_03128	0.68	-1.7
3,276,823	+		CCNA_03128	0.69	-0.5
3,276,823	+		CCNA_03128	0.69	-0.1
3,276,823	+		CCNA_03128	0.69	-0.6
3,276,831	-		CCNA_03128	0.70	+0.9
3,276,831	-		CCNA_03128	0.70	+1.5
3,276,831	-		CCNA_03128	0.70	+1.6
3,276,831	-		CCNA_03128	0.70	+1.9
3,276,868	-		CCNA_03128	0.74	-0.3
3,276,925	-		CCNA_03128	0.80	+1.4
3,276,974	+		CCNA_03128	0.85	+0.3
3,276,982	-		CCNA_03128	0.86	+0.7
3,276,999	-		CCNA_03128	0.88	+0.1
3,277,033	+				-0.3
3,277,042	-				+1.4
3,277,046	+				-0.3
3,277,051	+				-1.1
3,277,051	+				+0.5
3,277,051	+				-1.3
3,277,054	-				-0.2
3,277,064	-				-0.9
3,277,070	+				+0.2
3,277,085	+				+0.2
3,277,085	+				-0.2
3,277,085	+				+1.1
3,277,085	+				-0.2
3,277,085	+				-0.2
3,277,085	+				-0.1
3,277,085	+				+0.1
3,277,085	+				+1.0
3,277,093	-				+0.2
3,277,093	-				+0.4
3,277,093	-				-1.6
3,277,093	-				+1.5
3,277,093	-				+0.1
3,277,093	-				-0.3
3,277,093	-				-1.8
3,277,093	-				+0.5
3,277,093	-				+0.8
3,277,093	-				+2.0
3,277,093	-				+0.2
3,277,093	-				-1.4
3,277,093	-				+0.5
3,277,093	-				+1.6
3,277,093	-				-0.2
3,277,105	+				+0.1
3,277,120	+				+0.5
3,277,120	+				+1.2
3,277,120	+				-0.7
3,277,128	-				-0.6
3,277,128	-				-2.8
3,277,198	-				+0.3
3,277,203	+				+0.2
3,277,211	-				-1.5
3,277,226	+				-0.8
3,277,273	-				+0.6
3,277,273	-				+1.1
3,277,314	+				+0.7
3,277,318	+				-0.3
3,277,323	+				+0.5
3,277,328	+				-0.4
3,277,360	+				+1.6
3,277,368	-				+1.1
3,277,368	-				+1.6
3,277,368	-				+1.3
3,277,379	+				-0.6
3,277,379	+				-2.4
3,277,455	-		CCNA_03129	0.10	+2.2
3,277,462	+		CCNA_03129	0.11	+0.1
3,277,462	+		CCNA_03129	0.11	-0.7
3,277,470	-		CCNA_03129	0.11	+2.4
3,277,480	+		CCNA_03129	0.12	+0.3
3,277,488	-		CCNA_03129	0.12	+1.5
3,277,488	-		CCNA_03129	0.12	+2.0
3,277,537	-		CCNA_03129	0.16	+2.6
3,277,555	-		CCNA_03129	0.17	+2.3
3,277,571	+		CCNA_03129	0.19	+0.4
3,277,580	-		CCNA_03129	0.19	+2.2
3,277,608	-		CCNA_03129	0.21	+1.5
3,277,623	-		CCNA_03129	0.22	+2.5
3,277,634	-		CCNA_03129	0.23	+3.0
3,277,641	-		CCNA_03129	0.24	+2.5
3,277,655	-		CCNA_03129	0.25	+1.8
3,277,703	-		CCNA_03129	0.28	+2.4
3,277,746	-		CCNA_03129	0.31	+2.1
3,277,780	-		CCNA_03129	0.34	+2.3
3,277,795	-		CCNA_03129	0.35	+3.4
3,277,801	-		CCNA_03129	0.35	+2.5
3,277,830	-		CCNA_03129	0.37	+2.5
3,277,844	+		CCNA_03129	0.38	-1.0
3,277,913	+		CCNA_03129	0.43	-0.5
3,277,920	+		CCNA_03129	0.44	+1.4
3,277,958	-		CCNA_03129	0.47	+2.4
3,277,958	-		CCNA_03129	0.47	+2.1
3,277,966	+		CCNA_03129	0.47	-0.5
3,277,992	-		CCNA_03129	0.49	+2.0
3,278,033	+		CCNA_03129	0.52	+1.1
3,278,081	+		CCNA_03129	0.56	-0.1
3,278,099	+		CCNA_03129	0.57	+1.8
3,278,116	+		CCNA_03129	0.58	+1.1
3,278,134	-		CCNA_03129	0.59	+2.1
3,278,194	-		CCNA_03129	0.64	+2.3
3,278,221	+		CCNA_03129	0.66	+0.2
3,278,247	+		CCNA_03129	0.68	+1.0
3,278,277	-		CCNA_03129	0.70	+2.1
3,278,314	+		CCNA_03129	0.72	+1.3
3,278,358	+		CCNA_03129	0.76	+3.2
3,278,377	-		CCNA_03129	0.77	+2.6
3,278,409	-		CCNA_03129	0.79	+1.8
3,278,420	+		CCNA_03129	0.80	+0.8
3,278,428	-		CCNA_03129	0.81	+1.8
3,278,430	+		CCNA_03129	0.81	-0.0
3,278,464	-		CCNA_03129	0.83	+2.8
3,278,490	-		CCNA_03129	0.85	+2.1
3,278,513	-		CCNA_03129	0.87	+2.4
3,278,518	-		CCNA_03129	0.87	+1.8
3,278,549	+		CCNA_03129	0.90	+0.6
3,278,559	+				+1.1
3,278,561	-				+2.6
3,278,608	+				+0.2
3,278,616	-				+2.2
3,278,627	+				-0.1
3,278,645	-				+1.7
3,278,737	+				-1.3
3,278,757	+				-0.2
3,278,757	+				-1.0
3,278,780	-				+1.5
3,278,858	+				+0.7
3,278,858	+				+0.9
3,278,893	+				+0.4
3,278,893	+				-0.4
3,278,901	-				+2.2
3,278,927	-				+3.0
3,278,959	+				+0.3
3,278,967	-				+3.3
3,278,967	-				+3.2
3,278,967	-				+3.4
3,278,967	-				+3.0