Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02780

Experiment: PYE with Gentamicin 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Gentamicin 0.0005 mg/ml
2,937,561	-		CCNA_02779	0.58	-0.5
2,937,566	+		CCNA_02779	0.58	+0.4
2,937,581	+		CCNA_02779	0.59	+0.5
2,937,616	-		CCNA_02779	0.62	+0.6
2,937,618	-		CCNA_02779	0.62	-0.9
2,937,625	+		CCNA_02779	0.63	+1.2
2,937,625	+		CCNA_02779	0.63	+0.4
2,937,625	+		CCNA_02779	0.63	+1.8
2,937,625	+		CCNA_02779	0.63	+1.9
2,937,625	+				+1.5
2,937,625	+		CCNA_02779	0.63	-1.0
2,937,625	+		CCNA_02779	0.63	+0.8
2,937,625	+		CCNA_02779	0.63	+0.2
2,937,625	+		CCNA_02779	0.63	-0.0
2,937,625	+		CCNA_02779	0.63	+1.2
2,937,625	+		CCNA_02779	0.63	+1.8
2,937,628	-		CCNA_02779	0.63	+0.4
2,937,633	-		CCNA_02779	0.63	+0.5
2,937,633	-		CCNA_02779	0.63	+0.8
2,937,633	-		CCNA_02779	0.63	+1.0
2,937,633	-		CCNA_02779	0.63	+1.8
2,937,633	-		CCNA_02779	0.63	+0.6
2,937,633	-		CCNA_02779	0.63	+0.8
2,937,633	-		CCNA_02779	0.63	+1.5
2,937,633	-		CCNA_02779	0.63	+1.2
2,937,635	+		CCNA_02779	0.63	+0.9
2,937,635	+		CCNA_02779	0.63	+0.1
2,937,635	+		CCNA_02779	0.63	-0.3
2,937,670	+		CCNA_02779	0.66	+1.5
2,937,754	+		CCNA_02779	0.72	+0.1
2,937,754	+		CCNA_02779	0.72	+0.3
2,937,784	+		CCNA_02779	0.74	+1.0
2,937,845	+		CCNA_02779	0.79	-1.7
2,937,845	+		CCNA_02779	0.79	+0.4
2,937,845	+		CCNA_02779	0.79	+0.3
2,937,852	+		CCNA_02779	0.79	+0.5
2,937,857	+		CCNA_02779	0.80	-0.2
2,937,894	-		CCNA_02779	0.82	+0.8
2,937,897	-		CCNA_02779	0.82	-0.5
2,937,907	-		CCNA_02779	0.83	+0.3
2,937,935	-		CCNA_02779	0.85	+0.5
2,937,943	-		CCNA_02779	0.86	+1.1
2,937,953	-		CCNA_02779	0.87	-0.4
2,937,988	+		CCNA_02779	0.89	-0.1
2,937,988	+		CCNA_02779	0.89	-0.1
2,938,022	+				-0.4
2,938,076	-				+1.4
2,938,104	+				-0.3
2,938,130	+				-1.9
2,938,138	-				+0.2
2,938,162	+				-1.9
2,938,180	-				+0.6
2,938,189	-				-0.4
2,938,200	+				-2.5
2,938,200	+				+1.1
2,938,217	+				-1.3
2,938,217	+				-0.9
2,938,225	-				-0.8
2,938,225	-				+1.5
2,938,228	+				+1.1
2,938,236	-				-0.6
2,938,236	-				-0.7
2,938,236	-				+0.3
2,938,243	+				-0.4
2,938,243	+				-2.6
2,938,251	-				-0.7
2,938,270	+				+0.6
2,938,305	-				+0.3
2,938,327	+				+0.9
2,938,327	+				-0.8
2,938,356	+				+1.3
2,938,364	-				+0.5
2,938,391	+				+0.1
2,938,465	+				+1.5
2,938,465	+				-0.1
2,938,487	+				+0.9
2,938,487	-				-1.0
2,938,554	-				-0.4
2,938,557	+				+0.5
2,938,562	+				+2.1
2,938,595	-				-1.2
2,938,615	+				-0.4
2,938,621	+				-1.0
2,938,626	+				+0.0
2,938,640	-		CCNA_02780	0.11	+1.3
2,938,713	+		CCNA_02780	0.20	+0.6
2,938,713	+		CCNA_02780	0.20	-0.1
2,938,718	+		CCNA_02780	0.21	+0.6
2,938,721	-		CCNA_02780	0.21	+1.1
2,938,725	+		CCNA_02780	0.22	-1.1
2,938,725	+		CCNA_02780	0.22	-0.5
2,938,725	+		CCNA_02780	0.22	-0.8
2,938,725	+		CCNA_02780	0.22	-1.0
2,938,726	-		CCNA_02780	0.22	-1.1
2,938,733	-		CCNA_02780	0.23	-0.4
2,938,733	-		CCNA_02780	0.23	-1.5
2,938,755	-		CCNA_02780	0.25	-1.4
2,938,765	-		CCNA_02780	0.27	-1.9
2,938,770	+		CCNA_02780	0.27	+0.0
2,938,773	-		CCNA_02780	0.28	-0.6
2,938,773	-		CCNA_02780	0.28	+1.5
2,938,804	-		CCNA_02780	0.32	-0.1
2,938,806	+		CCNA_02780	0.32	-2.4
2,938,817	+		CCNA_02780	0.33	-0.0
2,938,819	+		CCNA_02780	0.34	+1.1
2,938,819	+		CCNA_02780	0.34	-0.9
2,938,827	-		CCNA_02780	0.35	+0.1
2,938,828	-		CCNA_02780	0.35	-0.5
2,938,857	+		CCNA_02780	0.38	-0.2
2,938,866	+		CCNA_02780	0.40	-1.3
2,938,866	+		CCNA_02780	0.40	-0.8
2,938,866	+		CCNA_02780	0.40	-0.8
2,938,874	-		CCNA_02780	0.41	+0.4
2,938,874	-		CCNA_02780	0.41	+1.8
2,938,874	-		CCNA_02780	0.41	+0.9
2,938,874	-		CCNA_02780	0.41	+1.8
2,938,876	+		CCNA_02780	0.41	-0.4
2,938,876	+		CCNA_02780	0.41	+0.8
2,938,881	+		CCNA_02780	0.41	+0.9
2,938,881	+		CCNA_02780	0.41	+0.3
2,938,881	+		CCNA_02780	0.41	+0.3
2,938,881	+		CCNA_02780	0.41	-0.1
2,938,894	+		CCNA_02780	0.43	+2.1
2,938,894	+		CCNA_02780	0.43	-0.2
2,938,894	+		CCNA_02780	0.43	-0.2
2,938,902	-		CCNA_02780	0.44	-0.3
2,938,907	-		CCNA_02780	0.45	+0.2
2,938,931	+		CCNA_02780	0.48	-1.1
2,938,934	-		CCNA_02780	0.48	+0.1
2,938,939	-		CCNA_02780	0.49	+0.6
2,938,954	+		CCNA_02780	0.51	-1.2
2,938,958	+		CCNA_02780	0.51	+0.8
2,938,969	-		CCNA_02780	0.53	-1.2
2,939,017	+		CCNA_02780	0.59	+1.1
2,939,026	+		CCNA_02780	0.60	-0.9
2,939,070	-		CCNA_02780	0.66	-0.9
2,939,088	+		CCNA_02780	0.68	-0.9
2,939,093	+		CCNA_02780	0.68	+0.7
2,939,096	+		CCNA_02780	0.69	+0.3
2,939,121	+		CCNA_02780	0.72	-0.3
2,939,129	+		CCNA_02780	0.73	-0.4
2,939,129	+		CCNA_02780	0.73	+0.2
2,939,129	+		CCNA_02780	0.73	-2.8
2,939,129	-		CCNA_02780	0.73	-0.5
2,939,137	-		CCNA_02780	0.74	+0.7
2,939,149	+		CCNA_02780	0.76	-2.0
2,939,149	+		CCNA_02780	0.76	+0.8
2,939,157	-		CCNA_02780	0.77	+0.2
2,939,182	+		CCNA_02780	0.80	+2.5
2,939,182	+		CCNA_02780	0.80	+0.8
2,939,182	+		CCNA_02780	0.80	+0.9
2,939,182	+		CCNA_02780	0.80	-0.4
2,939,182	+		CCNA_02780	0.80	+1.5
2,939,182	+		CCNA_02780	0.80	-0.3
2,939,182	+		CCNA_02780	0.80	-0.1
2,939,182	+		CCNA_02780	0.80	-0.1
2,939,182	+		CCNA_02780	0.80	+0.3
2,939,190	-		CCNA_02780	0.81	+1.3
2,939,190	-		CCNA_02780	0.81	-1.1
2,939,190	-		CCNA_02780	0.81	+0.9
2,939,190	-		CCNA_02780	0.81	+1.5
2,939,190	-		CCNA_02780	0.81	+0.1
2,939,190	-		CCNA_02780	0.81	-0.5
2,939,190	-		CCNA_02780	0.81	-1.2
2,939,190	-		CCNA_02780	0.81	-1.2
2,939,190	-		CCNA_02780	0.81	+0.6
2,939,190	-		CCNA_02780	0.81	+0.6
2,939,190	-		CCNA_02780	0.81	-1.0
2,939,190	-		CCNA_02780	0.81	-0.3
2,939,190	-		CCNA_02780	0.81	-1.5
2,939,190	-		CCNA_02780	0.81	-1.1
2,939,190	-		CCNA_02780	0.81	-2.3
2,939,228	+		CCNA_02780	0.86	-1.8
2,939,228	+		CCNA_02780	0.86	-0.8
2,939,262	-				-0.5
2,939,266	+				-0.4
2,939,267	-				-0.5
2,939,287	+				+0.6
2,939,297	+				-0.5
2,939,297	+				-0.4
2,939,297	+				+1.5
2,939,297	+				-0.7
2,939,297	+				-0.5
2,939,297	+				+0.9
2,939,305	-				+1.8
2,939,311	+				+0.6
2,939,341	+				-1.4
2,939,346	+				+1.8
2,939,346	+				-0.2
2,939,346	+				+1.1
2,939,354	-				-0.1
2,939,375	+				-0.7
2,939,390	+				-1.4
2,939,398	-				-1.6
2,939,428	-		CCNA_02781	0.13	+2.1
2,939,444	+		CCNA_02781	0.16	+1.5
2,939,454	+		CCNA_02781	0.17	+0.1
2,939,462	-		CCNA_02781	0.19	+0.8
2,939,479	+		CCNA_02781	0.22	+0.3
2,939,485	-		CCNA_02781	0.23	+1.3
2,939,494	+		CCNA_02781	0.24	+0.7
2,939,513	+		CCNA_02781	0.27	-0.1
2,939,513	+		CCNA_02781	0.27	+0.4
2,939,513	+		CCNA_02781	0.27	+0.3
2,939,513	+		CCNA_02781	0.27	-0.7
2,939,513	+		CCNA_02781	0.27	-0.3
2,939,513	+		CCNA_02781	0.27	-1.3
2,939,513	+		CCNA_02781	0.27	+3.6
2,939,513	+		CCNA_02781	0.27	-1.0
2,939,518	+		CCNA_02781	0.28	+0.5
2,939,521	-		CCNA_02781	0.29	-1.0
2,939,521	-		CCNA_02781	0.29	+0.6
2,939,541	-		CCNA_02781	0.32	-0.5
2,939,548	-		CCNA_02781	0.33	+1.6
2,939,572	+		CCNA_02781	0.37	-1.1
2,939,580	+		CCNA_02781	0.39	-0.7
2,939,582	+		CCNA_02781	0.39	+1.6
2,939,588	-		CCNA_02781	0.40	+0.4
2,939,588	-		CCNA_02781	0.40	+0.3
2,939,591	-		CCNA_02781	0.40	-0.8
2,939,609	+		CCNA_02781	0.43	-0.8
2,939,632	+		CCNA_02781	0.47	-0.2
2,939,633	+		CCNA_02781	0.47	-0.9
2,939,633	+		CCNA_02781	0.47	+0.3
2,939,669	+		CCNA_02781	0.53	+0.0
2,939,716	-		CCNA_02781	0.61	+0.5
2,939,748	+		CCNA_02781	0.67	-1.1
2,939,751	-		CCNA_02781	0.67	-1.4
2,939,790	+		CCNA_02781	0.74	+0.3
2,939,821	+		CCNA_02781	0.79	+0.0
2,939,832	+		CCNA_02781	0.81	-0.2
2,939,832	+		CCNA_02781	0.81	+0.9
2,939,855	-		CCNA_02781	0.85	+1.3
2,939,884	+		CCNA_02781	0.89	+0.6
2,939,892	-				-0.4
2,939,893	-				+1.6
2,939,908	+				+0.5
2,939,915	+				-0.5
2,939,916	-				+0.8
2,939,923	-				-1.0
2,939,925	+				+0.4
2,939,953	-				-1.0
2,939,954	-				-2.0
2,939,966	+				+0.9
2,939,982	+				-0.4
2,939,982	+				-0.4
2,940,003	+				+1.9
2,940,003	+				-1.5
2,940,003	+				+0.2
2,940,003	+				-1.5
2,940,003	+				+0.5
2,940,011	-				-1.1
2,940,013	+				-1.4
2,940,013	+				+0.4
2,940,013	+				+0.6
2,940,021	-		CCNA_02782	0.11	-1.4
2,940,027	-		CCNA_02782	0.12	+3.1
2,940,035	+		CCNA_02782	0.14	+0.4
2,940,035	+		CCNA_02782	0.14	-1.2
2,940,035	+		CCNA_02782	0.14	+2.0
2,940,038	-		CCNA_02782	0.14	+1.2
2,940,072	-		CCNA_02782	0.21	-0.3
2,940,106	-		CCNA_02782	0.28	+0.6
2,940,119	+		CCNA_02782	0.31	-0.4
2,940,119	+		CCNA_02782	0.31	+0.9
2,940,134	+		CCNA_02782	0.34	-0.4
2,940,142	-		CCNA_02782	0.36	-1.1
2,940,142	-		CCNA_02782	0.36	+0.3
2,940,153	+		CCNA_02782	0.38	-1.0
2,940,158	+		CCNA_02782	0.39	-0.0
2,940,210	+		CCNA_02782	0.50	+0.7
2,940,210	+		CCNA_02782	0.50	+0.7
2,940,211	+		CCNA_02782	0.50	+0.9
2,940,211	+		CCNA_02782	0.50	-0.4
2,940,219	-		CCNA_02782	0.51	-0.3
2,940,239	-		CCNA_02782	0.56	-0.8
2,940,271	+		CCNA_02782	0.62	-2.3
2,940,271	+		CCNA_02782	0.62	-0.8
2,940,328	+		CCNA_02782	0.74	+0.6