Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02682

Experiment: PYE with Gentamicin 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Gentamicin 0.0005 mg/ml
2,834,257	+		CCNA_02681	0.34	+0.7
2,834,261	+		CCNA_02681	0.34	-0.1
2,834,271	+		CCNA_02681	0.35	+0.7
2,834,271	+		CCNA_02681	0.35	-0.4
2,834,271	+		CCNA_02681	0.35	-1.1
2,834,354	-		CCNA_02681	0.40	-0.6
2,834,412	+		CCNA_02681	0.44	-1.3
2,834,420	-		CCNA_02681	0.45	-0.7
2,834,439	-		CCNA_02681	0.46	+1.5
2,834,444	-		CCNA_02681	0.47	-1.6
2,834,565	-		CCNA_02681	0.55	+4.0
2,834,579	+		CCNA_02681	0.56	-0.2
2,834,592	+		CCNA_02681	0.57	-0.2
2,834,595	-		CCNA_02681	0.57	+0.0
2,834,600	-		CCNA_02681	0.58	-0.2
2,834,618	+		CCNA_02681	0.59	-1.4
2,834,618	+		CCNA_02681	0.59	-0.2
2,834,618	+		CCNA_02681	0.59	+1.4
2,834,626	-		CCNA_02681	0.59	-0.9
2,834,626	-		CCNA_02681	0.59	+0.1
2,834,632	-		CCNA_02681	0.60	-0.7
2,834,632	-		CCNA_02681	0.60	-0.9
2,834,646	+		CCNA_02681	0.61	-0.4
2,834,666	-		CCNA_02681	0.62	-0.8
2,834,666	-		CCNA_02681	0.62	-0.6
2,834,678	-		CCNA_02681	0.63	-1.2
2,834,776	-		CCNA_02681	0.70	-0.3
2,834,783	+		CCNA_02681	0.70	-0.5
2,834,844	-		CCNA_02681	0.75	+0.8
2,834,852	+		CCNA_02681	0.75	-0.7
2,834,901	+		CCNA_02681	0.79	+0.6
2,834,909	-		CCNA_02681	0.79	-0.9
2,834,962	-		CCNA_02681	0.83	-1.9
2,834,987	-		CCNA_02681	0.85	-1.2
2,835,002	+		CCNA_02681	0.86	+0.8
2,835,059	+		CCNA_02681	0.90	+1.4
2,835,197	+				+0.3
2,835,198	+				-0.1
2,835,248	+				+1.4
2,835,248	+				-0.7
2,835,250	-				+0.4
2,835,256	-				-0.8
2,835,268	+				+1.2
2,835,275	+				+0.6
2,835,287	+				-0.3
2,835,346	-		CCNA_02682	0.17	+0.1
2,835,353	+		CCNA_02682	0.18	+0.2
2,835,353	+		CCNA_02682	0.18	+0.8
2,835,353	+		CCNA_02682	0.18	-0.2
2,835,353	+		CCNA_02682	0.18	-0.1
2,835,353	+		CCNA_02682	0.18	-0.2
2,835,354	+		CCNA_02682	0.18	-0.3
2,835,361	-		CCNA_02682	0.19	-0.3
2,835,361	-		CCNA_02682	0.19	-0.0
2,835,361	-		CCNA_02682	0.19	+0.1
2,835,372	+		CCNA_02682	0.20	+0.5
2,835,372	+		CCNA_02682	0.20	-0.1
2,835,386	-		CCNA_02682	0.22	-1.4
2,835,419	-		CCNA_02682	0.26	+0.4
2,835,441	+		CCNA_02682	0.29	-1.6
2,835,476	-		CCNA_02682	0.34	+0.1
2,835,576	+		CCNA_02682	0.47	+0.4
2,835,583	+		CCNA_02682	0.48	-1.1
2,835,594	+		CCNA_02682	0.49	-0.9
2,835,610	-		CCNA_02682	0.51	-0.9
2,835,615	+		CCNA_02682	0.52	-0.8
2,835,623	+		CCNA_02682	0.53	-1.7
2,835,698	+		CCNA_02682	0.63	-1.6
2,835,715	+		CCNA_02682	0.65	-0.9
2,835,735	-		CCNA_02682	0.67	+1.0
2,835,738	+		CCNA_02682	0.68	+0.5
2,835,746	-		CCNA_02682	0.69	+0.0
2,835,746	-		CCNA_02682	0.69	+0.1
2,835,764	+		CCNA_02682	0.71	+0.4
2,835,790	-		CCNA_02682	0.74	-0.2
2,835,792	+		CCNA_02682	0.75	-0.8
2,835,818	-		CCNA_02682	0.78	-1.3
2,835,818	-		CCNA_02682	0.78	-0.6
2,835,826	+		CCNA_02682	0.79	-0.1
2,835,887	-		CCNA_02682	0.87	+0.9
2,835,893	-		CCNA_02682	0.88	+0.1
2,835,905	-		CCNA_02682	0.89	-0.5
2,835,906	-		CCNA_02682	0.89	-0.9
2,835,921	-				-0.5
2,835,943	+				-0.7
2,836,004	-				-2.2
2,836,011	+				-0.9
2,836,022	+				+1.6
2,836,030	-				-0.8
2,836,053	-				-0.0
2,836,080	+				-0.0
2,836,083	-				+0.1
2,836,103	-				+0.8
2,836,118	+		CCNA_02683	0.10	+0.3
2,836,178	-		CCNA_02683	0.15	+0.4
2,836,178	-		CCNA_02683	0.15	+1.0
2,836,221	-		CCNA_02683	0.18	-1.9
2,836,230	+		CCNA_02683	0.19	-0.5
2,836,232	+		CCNA_02683	0.19	+1.0
2,836,239	-		CCNA_02683	0.19	+0.7
2,836,248	+		CCNA_02683	0.20	-0.0
2,836,296	-		CCNA_02683	0.23	-0.1
2,836,322	+		CCNA_02683	0.25	-2.4
2,836,334	+		CCNA_02683	0.26	-0.8
2,836,385	-		CCNA_02683	0.30	+0.4
2,836,388	+		CCNA_02683	0.30	-0.9
2,836,428	+		CCNA_02683	0.33	-0.7
2,836,428	+		CCNA_02683	0.33	+0.8
2,836,428	+		CCNA_02683	0.33	-1.0
2,836,436	-		CCNA_02683	0.34	+1.3
2,836,443	+		CCNA_02683	0.35	-1.4
2,836,450	-		CCNA_02683	0.35	+0.8
2,836,462	+		CCNA_02683	0.36	-0.1
2,836,462	+		CCNA_02683	0.36	-0.4
2,836,462	+		CCNA_02683	0.36	-1.0
2,836,470	-		CCNA_02683	0.37	-1.4
2,836,470	-		CCNA_02683	0.37	-0.5
2,836,507	+		CCNA_02683	0.39	+1.0
2,836,514	-		CCNA_02683	0.40	-0.4
2,836,573	+		CCNA_02683	0.44	-0.8
2,836,573	+		CCNA_02683	0.44	-0.8
2,836,631	+		CCNA_02683	0.49	+1.0
2,836,635	-		CCNA_02683	0.49	-0.9
2,836,645	-		CCNA_02683	0.50	+0.8
2,836,683	+		CCNA_02683	0.53	+0.0
2,836,730	+		CCNA_02683	0.56	+0.4
2,836,777	+		CCNA_02683	0.60	-0.8
2,836,856	-		CCNA_02683	0.66	+1.3
2,836,898	+		CCNA_02683	0.69	-0.2
2,836,901	-		CCNA_02683	0.69	+1.0
2,836,906	-		CCNA_02683	0.69	-1.1
2,836,906	-				+2.8
2,836,906	-		CCNA_02683	0.69	+0.5
2,836,907	-		CCNA_02683	0.69	-1.0
2,836,925	-		CCNA_02683	0.71	-1.1
2,836,925	-		CCNA_02683	0.71	+0.1