Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02548

Experiment: PYE with Gentamicin 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Gentamicin 0.0005 mg/ml
2,695,450	-		CCNA_02546	0.64	+1.8
2,695,455	-		CCNA_02546	0.64	+1.1
2,695,485	+		CCNA_02546	0.66	-0.2
2,695,495	+		CCNA_02546	0.67	+1.8
2,695,503	-		CCNA_02546	0.68	+1.4
2,695,534	-		CCNA_02546	0.70	+1.8
2,695,545	-		CCNA_02546	0.71	+2.4
2,695,558	-		CCNA_02546	0.72	+2.3
2,695,584	+		CCNA_02546	0.74	+3.2
2,695,584	+		CCNA_02546	0.74	+0.5
2,695,592	-		CCNA_02546	0.74	+1.7
2,695,592	-		CCNA_02546	0.74	+2.4
2,695,611	+		CCNA_02546	0.76	+1.0
2,695,617	-		CCNA_02546	0.76	+3.3
2,695,642	-		CCNA_02546	0.78	+1.6
2,695,672	-		CCNA_02546	0.80	+2.3
2,695,697	+		CCNA_02546	0.82	-1.4
2,695,707	-		CCNA_02546	0.83	+2.3
2,695,736	+		CCNA_02546	0.85	+0.4
2,695,751	-		CCNA_02546	0.86	+1.7
2,695,751	-		CCNA_02546	0.86	+1.2
2,695,772	-		CCNA_02546	0.87	+2.0
2,695,809	-				+2.0
2,695,820	+				+0.3
2,695,820	+				+1.0
2,695,820	+				+0.4
2,695,820	+				-1.2
2,695,825	+				-1.4
2,695,825	+				-0.0
2,695,825	+				-0.0
2,695,828	-				+2.1
2,695,828	-				+1.3
2,695,828	-				+2.0
2,695,828	-				+1.9
2,695,828	-				+1.3
2,695,828	-				+2.0
2,695,828	-				+2.0
2,695,868	-				+1.6
2,695,868	-				+1.1
2,695,875	-				+2.1
2,695,885	+				-0.4
2,695,894	-				+1.5
2,695,946	-				+2.0
2,696,318	+				-1.2
2,696,318	+				+0.3
2,696,318	+				-0.5
2,696,318	+				+1.8
2,696,326	-				+1.2
2,696,326	-				+0.2
2,696,326	-				+0.4
2,696,326	-				-0.2
2,696,326	-				+0.9
2,696,326	-				+0.8
2,696,326	-				+0.3
2,696,326	-				+0.9
2,696,326	-				+0.0
2,696,349	-				+0.0
2,696,375	-				-0.3
2,696,390	+				-0.8
2,696,395	+				+2.2
2,696,395	+				+2.2
2,696,403	-				+0.4
2,696,403	-				+0.1
2,696,403	-				-1.8
2,696,403	-				-0.6
2,696,403	-				-0.5
2,696,426	+				+1.4
2,696,453	+				-1.3
2,696,456	-				-2.5
2,696,471	+				-1.3
2,696,471	+				-0.1
2,696,471	+				+0.2
2,696,471	+				-0.3
2,696,471	+				+1.6
2,696,476	+				-0.1
2,696,476	+				-0.7
2,696,478	-				-0.6
2,696,479	-				-0.7
2,696,499	-				+0.0
2,696,527	-		CCNA_02548	0.13	-1.3
2,696,540	+		CCNA_02548	0.15	+0.4
2,696,549	+		CCNA_02548	0.17	+0.4
2,696,567	+		CCNA_02548	0.20	-0.6
2,696,575	-		CCNA_02548	0.21	-1.0
2,696,588	+		CCNA_02548	0.23	-0.5
2,696,588	+		CCNA_02548	0.23	-0.2
2,696,598	+		CCNA_02548	0.24	+1.4
2,696,598	+		CCNA_02548	0.24	-1.0
2,696,606	-		CCNA_02548	0.26	-1.4
2,696,607	-		CCNA_02548	0.26	+1.0
2,696,620	+		CCNA_02548	0.28	+0.2
2,696,621	+		CCNA_02548	0.28	+0.8
2,696,629	-		CCNA_02548	0.29	-0.0
2,696,634	-		CCNA_02548	0.30	-1.0
2,696,656	+		CCNA_02548	0.33	-0.5
2,696,692	+		CCNA_02548	0.39	-0.3
2,696,700	-		CCNA_02548	0.40	-2.3
2,696,700	-		CCNA_02548	0.40	+1.0
2,696,700	-		CCNA_02548	0.40	-0.3
2,696,700	-		CCNA_02548	0.40	-0.5
2,696,700	-		CCNA_02548	0.40	-1.4
2,696,700	-		CCNA_02548	0.40	-1.4
2,696,720	+		CCNA_02548	0.43	-1.1
2,696,721	+		CCNA_02548	0.43	-0.4
2,696,724	-		CCNA_02548	0.44	+1.7
2,696,725	-		CCNA_02548	0.44	-0.4
2,696,741	-		CCNA_02548	0.46	+0.4
2,696,751	+		CCNA_02548	0.48	-0.3
2,696,752	-		CCNA_02548	0.48	-0.6
2,696,758	+		CCNA_02548	0.49	+0.7
2,696,758	+		CCNA_02548	0.49	-0.6
2,696,766	-		CCNA_02548	0.50	-0.0
2,696,766	-		CCNA_02548	0.50	-0.7
2,696,804	+		CCNA_02548	0.56	+0.4
2,696,804	+		CCNA_02548	0.56	+0.2
2,696,805	+		CCNA_02548	0.56	+0.4
2,696,825	+		CCNA_02548	0.59	+0.8
2,696,826	-		CCNA_02548	0.60	+1.2
2,696,827	-		CCNA_02548	0.60	-1.5
2,696,830	+		CCNA_02548	0.60	-0.4
2,696,835	+		CCNA_02548	0.61	+1.2
2,696,838	-		CCNA_02548	0.61	+0.0
2,696,851	+		CCNA_02548	0.63	-0.9
2,696,872	+		CCNA_02548	0.67	+0.6
2,696,883	+		CCNA_02548	0.68	+0.2
2,696,883	+		CCNA_02548	0.68	+0.2
2,696,888	+		CCNA_02548	0.69	-2.1
2,696,888	+		CCNA_02548	0.69	+0.3
2,696,888	+		CCNA_02548	0.69	-1.1
2,696,888	+		CCNA_02548	0.69	+0.7
2,696,888	+		CCNA_02548	0.69	-1.6
2,696,888	+		CCNA_02548	0.69	-0.4
2,696,896	-		CCNA_02548	0.70	-0.3
2,696,896	-		CCNA_02548	0.70	-0.8
2,696,916	+		CCNA_02548	0.73	-0.1
2,696,936	-		CCNA_02548	0.77	-0.5
2,696,958	+		CCNA_02548	0.80	-0.5
2,696,961	-		CCNA_02548	0.80	-1.1
2,696,999	+		CCNA_02548	0.86	-2.9
2,697,022	-		CCNA_02548	0.90	+1.1
2,697,049	+				-1.1
2,697,119	+				+0.9
2,697,172	+				-0.2
2,697,180	-		CCNA_02549	0.11	-1.0
2,697,181	-		CCNA_02549	0.11	-1.1
2,697,200	+		CCNA_02549	0.13	-0.6
2,697,208	-		CCNA_02549	0.14	-1.2
2,697,229	-		CCNA_02549	0.16	-0.6
2,697,236	+		CCNA_02549	0.17	+0.7
2,697,267	+		CCNA_02549	0.21	+1.5
2,697,267	+		CCNA_02549	0.21	-1.0
2,697,267	+		CCNA_02549	0.21	+0.2
2,697,275	-		CCNA_02549	0.21	+1.4
2,697,296	-		CCNA_02549	0.24	+0.1
2,697,303	+		CCNA_02549	0.25	+1.2
2,697,303	+		CCNA_02549	0.25	+0.9
2,697,303	+		CCNA_02549	0.25	-0.8
2,697,311	-		CCNA_02549	0.25	-0.8
2,697,311	-		CCNA_02549	0.25	+2.8
2,697,311	-		CCNA_02549	0.25	-0.6
2,697,359	+		CCNA_02549	0.31	+0.6
2,697,366	-		CCNA_02549	0.32	-1.0
2,697,409	+		CCNA_02549	0.36	+0.2
2,697,409	+		CCNA_02549	0.36	+1.1
2,697,409	+		CCNA_02549	0.36	+0.7
2,697,409	+				+1.8
2,697,419	+		CCNA_02549	0.38	+1.4
2,697,419	+		CCNA_02549	0.38	+0.3
2,697,419	+		CCNA_02549	0.38	-0.3
2,697,422	-		CCNA_02549	0.38	-1.1
2,697,427	-		CCNA_02549	0.38	-1.9
2,697,506	-		CCNA_02549	0.47	-1.0
2,697,536	+		CCNA_02549	0.51	+0.7
2,697,552	+		CCNA_02549	0.53	+0.4
2,697,565	-		CCNA_02549	0.54	+0.4
2,697,566	+		CCNA_02549	0.54	+0.9
2,697,566	+		CCNA_02549	0.54	+0.8
2,697,566	+		CCNA_02549	0.54	+0.3
2,697,566	+		CCNA_02549	0.54	+0.4
2,697,566	+		CCNA_02549	0.54	+0.3
2,697,566	+		CCNA_02549	0.54	-0.8
2,697,569	-		CCNA_02549	0.54	-1.0
2,697,569	-		CCNA_02549	0.54	-1.6
2,697,572	+		CCNA_02549	0.55	+1.1
2,697,574	-		CCNA_02549	0.55	-1.0
2,697,574	-		CCNA_02549	0.55	+0.3
2,697,574	-		CCNA_02549	0.55	-1.6
2,697,574	-		CCNA_02549	0.55	-1.4
2,697,574	-		CCNA_02549	0.55	+0.4
2,697,574	-		CCNA_02549	0.55	+0.1
2,697,574	-		CCNA_02549	0.55	-1.6
2,697,574	-		CCNA_02549	0.55	-1.2
2,697,585	-		CCNA_02549	0.56	-2.3
2,697,586	-		CCNA_02549	0.56	-1.2
2,697,615	+		CCNA_02549	0.60	+1.4
2,697,615	+		CCNA_02549	0.60	+0.1
2,697,677	-		CCNA_02549	0.67	+0.1
2,697,717	+		CCNA_02549	0.71	-1.6
2,697,722	+		CCNA_02549	0.72	+0.9
2,697,730	-		CCNA_02549	0.73	-1.0
2,697,740	-		CCNA_02549	0.74	+0.0
2,697,764	+				+2.0
2,697,766	-		CCNA_02549	0.77	+0.3
2,697,771	+		CCNA_02549	0.77	-0.2
2,697,772	-		CCNA_02549	0.77	-0.8
2,697,807	+		CCNA_02549	0.81	+2.7
2,697,815	-		CCNA_02549	0.82	-0.6
2,697,838	+		CCNA_02549	0.85	+0.7
2,697,842	+		CCNA_02549	0.85	-0.6
2,697,884	-		CCNA_02549	0.90	-0.5
2,697,905	+				+0.3
2,697,905	+				-0.0
2,697,905	+				+2.2
2,697,912	+				+0.6
2,697,912	+				+0.7
2,697,913	-				+1.2
2,697,920	-				-1.1
2,697,926	+				+0.5
2,697,933	+				+2.2
2,697,933	+				-0.1
2,697,936	-				-0.5
2,697,936	-				+0.6
2,697,947	+				-1.9
2,697,948	+				+0.5
2,697,948	+				+0.9
2,697,976	-				-2.4
2,697,976	-				-1.6
2,698,034	-				+1.0
2,698,036	+				-0.6
2,698,062	+				-1.0
2,698,074	-				-1.6