Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02489

Experiment: PYE with Gentamicin 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Gentamicin 0.0005 mg/ml
2,636,163	+		CCNA_02487	0.82	+0.2
2,636,208	-		CCNA_02487	0.86	+0.6
2,636,214	-		CCNA_02487	0.87	-1.0
2,636,244	+		CCNA_02487	0.89	-0.3
2,636,259	+				-1.8
2,636,282	-				+1.6
2,636,311	+				-1.3
2,636,311	+				+0.3
2,636,311	+				-0.1
2,636,335	+				-1.3
2,636,342	-				-0.5
2,636,361	+				-0.8
2,636,374	+				+1.9
2,636,380	-				-0.1
2,636,389	-				+0.4
2,636,389	-				-0.5
2,636,392	-				-0.6
2,636,408	+				-0.2
2,636,416	-				+0.3
2,636,416	-				-0.9
2,636,429	+				-0.1
2,636,429	+				-0.8
2,636,429	+				-2.5
2,636,429	+				-0.3
2,636,437	-				-1.2
2,636,437	-				-0.7
2,636,437	-				+0.0
2,636,437	-				-1.0
2,636,437	-				-0.7
2,636,437	-				+0.9
2,636,454	+				-0.7
2,636,459	+		CCNA_02488	0.10	+2.7
2,636,467	-		CCNA_02488	0.11	+1.9
2,636,475	+		CCNA_02488	0.12	+1.2
2,636,510	-		CCNA_02488	0.17	-1.3
2,636,521	-		CCNA_02488	0.19	-0.6
2,636,529	-		CCNA_02488	0.20	+2.8
2,636,546	-		CCNA_02488	0.22	+0.4
2,636,591	+		CCNA_02488	0.28	-0.2
2,636,599	-		CCNA_02488	0.29	+2.2
2,636,666	-		CCNA_02488	0.38	+1.4
2,636,757	-		CCNA_02488	0.51	-2.0
2,636,777	+		CCNA_02488	0.53	-0.4
2,636,788	+		CCNA_02488	0.55	-0.5
2,636,798	+		CCNA_02488	0.56	-0.3
2,636,817	+		CCNA_02488	0.59	+1.4
2,636,958	-		CCNA_02488	0.78	+0.5
2,636,966	+		CCNA_02488	0.79	+0.2
2,636,967	-		CCNA_02488	0.79	-0.3
2,636,985	+		CCNA_02488	0.81	-1.9
2,637,017	+		CCNA_02488	0.86	-0.3
2,637,095	-				-2.6
2,637,102	+				+0.6
2,637,122	-				+0.7
2,637,123	+				+0.7
2,637,255	-		CCNA_02489	0.21	-2.5
2,637,281	-		CCNA_02489	0.25	-0.8
2,637,307	+		CCNA_02489	0.29	-2.1
2,637,310	-		CCNA_02489	0.29	-1.3
2,637,313	+		CCNA_02489	0.30	+0.9
2,637,315	-		CCNA_02489	0.30	-0.3
2,637,316	-		CCNA_02489	0.30	-0.9
2,637,318	+		CCNA_02489	0.30	+0.4
2,637,326	-		CCNA_02489	0.32	+0.3
2,637,326	-		CCNA_02489	0.32	+1.1
2,637,341	+		CCNA_02489	0.34	-0.3
2,637,341	+		CCNA_02489	0.34	+0.1
2,637,349	-		CCNA_02489	0.35	+0.2
2,637,349	-		CCNA_02489	0.35	+0.4
2,637,349	-		CCNA_02489	0.35	-1.0
2,637,355	+		CCNA_02489	0.36	-0.1
2,637,372	-		CCNA_02489	0.39	-2.1
2,637,376	+		CCNA_02489	0.39	-0.3
2,637,376	+		CCNA_02489	0.39	-1.3
2,637,376	+		CCNA_02489	0.39	-0.5
2,637,376	+		CCNA_02489	0.39	+0.0
2,637,384	-		CCNA_02489	0.41	-0.3
2,637,384	-		CCNA_02489	0.41	+1.2
2,637,384	-		CCNA_02489	0.41	+0.8
2,637,384	-		CCNA_02489	0.41	+1.4
2,637,384	-		CCNA_02489	0.41	-0.1
2,637,384	-		CCNA_02489	0.41	-0.6
2,637,384	-		CCNA_02489	0.41	-1.5
2,637,393	+		CCNA_02489	0.42	+0.5
2,637,401	-		CCNA_02489	0.43	-2.0
2,637,494	-		CCNA_02489	0.58	-0.7
2,637,563	+		CCNA_02489	0.68	+0.9
2,637,568	+		CCNA_02489	0.69	-1.1
2,637,581	-		CCNA_02489	0.71	+0.0
2,637,588	-		CCNA_02489	0.72	-1.4
2,637,601	+		CCNA_02489	0.74	+0.2
2,637,603	-		CCNA_02489	0.74	-1.3
2,637,608	-		CCNA_02489	0.75	+0.9
2,637,608	-		CCNA_02489	0.75	+0.6
2,637,609	-		CCNA_02489	0.75	-2.5
2,637,660	+		CCNA_02489	0.83	+0.4
2,637,677	+		CCNA_02489	0.86	-1.3
2,637,698	+		CCNA_02489	0.89	-0.6
2,637,706	-				-3.7
2,637,706	-				-0.1
2,637,706	-				+1.3
2,637,719	+				-1.5
2,637,734	-				-0.6
2,637,752	-				-1.1
2,638,283	+		CCNA_02490	0.43	+0.2
2,638,302	+		CCNA_02490	0.45	+0.4
2,638,312	+		CCNA_02490	0.46	-0.4
2,638,516	+		CCNA_02490	0.63	-3.0
2,638,524	+		CCNA_02490	0.63	-1.0
2,638,547	+		CCNA_02490	0.65	-1.0
2,638,549	-		CCNA_02490	0.65	-0.7
2,638,550	-		CCNA_02490	0.65	+0.5