Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02484

Experiment: PYE with Gentamicin 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Gentamicin 0.0005 mg/ml
2,630,770	-		CCNA_02483	0.37	+0.2
2,630,770	-		CCNA_02483	0.37	+0.2
2,630,792	+		CCNA_02483	0.38	-0.9
2,630,797	+		CCNA_02483	0.39	-1.0
2,630,834	-		CCNA_02483	0.41	+1.4
2,630,842	+		CCNA_02483	0.42	-1.5
2,630,842	+		CCNA_02483	0.42	-2.0
2,630,860	+		CCNA_02483	0.43	-0.9
2,630,882	+		CCNA_02483	0.44	+1.4
2,630,937	+		CCNA_02483	0.48	+0.4
2,630,968	+		CCNA_02483	0.50	-0.8
2,630,977	+		CCNA_02483	0.51	-0.4
2,630,985	-		CCNA_02483	0.51	+0.1
2,630,995	-		CCNA_02483	0.52	-1.5
2,631,000	+		CCNA_02483	0.52	-0.1
2,631,040	+		CCNA_02483	0.55	+0.2
2,631,057	+		CCNA_02483	0.56	+1.4
2,631,065	-		CCNA_02483	0.57	+1.0
2,631,066	-		CCNA_02483	0.57	-1.7
2,631,084	+		CCNA_02483	0.58	+0.1
2,631,095	+		CCNA_02483	0.59	+0.1
2,631,095	+		CCNA_02483	0.59	+0.4
2,631,095	+		CCNA_02483	0.59	-0.4
2,631,103	-		CCNA_02483	0.59	+0.6
2,631,114	+		CCNA_02483	0.60	-0.2
2,631,122	-		CCNA_02483	0.60	+0.4
2,631,185	-		CCNA_02483	0.65	-0.8
2,631,198	-		CCNA_02483	0.65	+1.2
2,631,240	+		CCNA_02483	0.68	-0.1
2,631,240	+		CCNA_02483	0.68	-1.5
2,631,240	+		CCNA_02483	0.68	-0.1
2,631,240	+		CCNA_02483	0.68	-0.4
2,631,248	-		CCNA_02483	0.69	+1.2
2,631,248	-		CCNA_02483	0.69	-1.2
2,631,248	-		CCNA_02483	0.69	-1.3
2,631,248	-		CCNA_02483	0.69	+0.6
2,631,275	-		CCNA_02483	0.71	-1.0
2,631,275	-		CCNA_02483	0.71	+0.3
2,631,283	-		CCNA_02483	0.71	-0.8
2,631,293	-		CCNA_02483	0.72	+0.3
2,631,363	-		CCNA_02483	0.77	-0.2
2,631,365	+		CCNA_02483	0.77	-0.0
2,631,388	-		CCNA_02483	0.78	+0.6
2,631,391	-		CCNA_02483	0.78	-0.2
2,631,480	+		CCNA_02483	0.84	+0.2
2,631,492	+		CCNA_02483	0.85	-2.2
2,631,522	+		CCNA_02483	0.87	-0.3
2,631,559	+		CCNA_02483	0.90	-1.0
2,631,567	-				+0.3
2,631,573	-				-1.7
2,631,573	-				+0.7
2,631,583	+				-0.3
2,631,596	+				-0.7
2,631,621	-				-0.5
2,631,621	-				+1.9
2,631,621	-				+1.5
2,631,623	+				-0.5
2,631,624	-				+1.0
2,631,626	-				+0.4
2,631,626	-				-1.4
2,631,669	+				+1.0
2,631,749	+				+0.9
2,631,754	+				+0.7
2,631,762	-				+1.6
2,631,767	-				-0.9
2,631,767	-				+1.2
2,631,773	+				-2.8
2,631,788	+				+0.3
2,631,790	-				-0.3
2,631,811	+				+1.3
2,631,829	-				-0.0
2,631,829	-				-0.4
2,631,841	-		CCNA_02484	0.10	-0.3
2,631,874	+		CCNA_02484	0.14	-1.5
2,631,896	-		CCNA_02484	0.17	-0.1
2,631,953	-		CCNA_02484	0.24	-0.2
2,631,994	-		CCNA_02484	0.29	+0.6
2,631,994	-		CCNA_02484	0.29	-0.6
2,632,109	+		CCNA_02484	0.43	+1.2
2,632,109	+		CCNA_02484	0.43	-0.6
2,632,109	+		CCNA_02484	0.43	+1.2
2,632,109	+		CCNA_02484	0.43	-0.4
2,632,109	+		CCNA_02484	0.43	+1.3
2,632,115	+		CCNA_02484	0.43	-1.3
2,632,117	-		CCNA_02484	0.44	-1.9
2,632,117	-		CCNA_02484	0.44	-1.7
2,632,117	-		CCNA_02484	0.44	-0.8
2,632,117	-		CCNA_02484	0.44	+0.2
2,632,165	+		CCNA_02484	0.49	-2.5
2,632,173	-		CCNA_02484	0.50	-0.7
2,632,180	+		CCNA_02484	0.51	-0.1
2,632,184	-		CCNA_02484	0.52	-1.0
2,632,234	-		CCNA_02484	0.58	-1.3
2,632,305	+		CCNA_02484	0.66	+1.2
2,632,318	+		CCNA_02484	0.68	-1.5
2,632,338	+		CCNA_02484	0.70	-0.5
2,632,338	+		CCNA_02484	0.70	+0.2
2,632,346	-		CCNA_02484	0.71	-0.2
2,632,346	-		CCNA_02484	0.71	+0.6
2,632,365	+		CCNA_02484	0.74	-0.3
2,632,380	+		CCNA_02484	0.75	+0.2
2,632,381	-		CCNA_02484	0.75	-0.4
2,632,398	+		CCNA_02484	0.78	-1.4
2,632,418	+		CCNA_02484	0.80	-1.5
2,632,446	+		CCNA_02484	0.83	+1.2
2,632,479	+		CCNA_02484	0.87	-2.7
2,632,479	+		CCNA_02484	0.87	+0.3
2,632,486	-		CCNA_02484	0.88	-1.2
2,632,487	-		CCNA_02484	0.88	+0.7
2,632,487	-		CCNA_02484	0.88	-0.7
2,632,492	-		CCNA_02484	0.89	-0.3
2,632,492	-		CCNA_02484	0.89	+1.2
2,632,567	+				+1.3
2,632,587	-				+0.2
2,632,639	-				-0.5
2,632,660	+				+0.5
2,632,668	-				-0.1
2,632,673	+				+0.9
2,632,681	-				-0.9
2,632,705	+				+1.2
2,632,731	-				-0.5
2,632,756	+				+0.0
2,632,757	+				-2.6
2,632,771	+				-1.8
2,632,791	+		CCNA_02485	0.11	+4.4
2,632,795	+		CCNA_02485	0.11	+1.7
2,632,803	-		CCNA_02485	0.12	+1.3
2,632,837	+		CCNA_02485	0.14	+0.2
2,632,849	+		CCNA_02485	0.15	+0.0
2,632,849	+		CCNA_02485	0.15	+0.4
2,632,877	-		CCNA_02485	0.17	+0.2
2,632,883	+		CCNA_02485	0.17	+0.5
2,632,932	-		CCNA_02485	0.21	+0.4
2,632,941	+		CCNA_02485	0.22	-0.5
2,632,941	+		CCNA_02485	0.22	+0.8
2,632,979	-		CCNA_02485	0.24	-1.3
2,632,994	+		CCNA_02485	0.25	-0.2
2,633,010	-		CCNA_02485	0.26	-0.7
2,633,030	+		CCNA_02485	0.28	-1.3
2,633,030	+		CCNA_02485	0.28	+0.3
2,633,035	+		CCNA_02485	0.28	+1.7
2,633,068	+		CCNA_02485	0.31	+0.4
2,633,075	+		CCNA_02485	0.31	-0.1
2,633,075	+		CCNA_02485	0.31	+0.1
2,633,083	-		CCNA_02485	0.32	+1.2
2,633,093	+		CCNA_02485	0.32	+0.7
2,633,101	-		CCNA_02485	0.33	+2.1
2,633,101	-		CCNA_02485	0.33	+0.6
2,633,111	+		CCNA_02485	0.34	+0.7
2,633,136	-		CCNA_02485	0.35	-1.1
2,633,163	-		CCNA_02485	0.37	+0.2
2,633,210	+		CCNA_02485	0.41	-1.2
2,633,218	-		CCNA_02485	0.41	-1.1
2,633,218	-		CCNA_02485	0.41	+1.0
2,633,218	-		CCNA_02485	0.41	-0.5
2,633,239	-		CCNA_02485	0.43	-0.6
2,633,281	-		CCNA_02485	0.46	-0.3
2,633,294	-		CCNA_02485	0.47	+1.2
2,633,342	-		CCNA_02485	0.50	-1.8
2,633,348	+		CCNA_02485	0.50	+0.2
2,633,348	+		CCNA_02485	0.50	-0.7
2,633,348	+		CCNA_02485	0.50	-0.5
2,633,348	+		CCNA_02485	0.50	-0.3
2,633,348	+		CCNA_02485	0.50	-0.2
2,633,356	-		CCNA_02485	0.51	-0.6
2,633,356	-		CCNA_02485	0.51	+0.8
2,633,356	-		CCNA_02485	0.51	+0.4
2,633,356	-		CCNA_02485	0.51	-2.1
2,633,356	-		CCNA_02485	0.51	-0.7
2,633,468	+		CCNA_02485	0.59	-1.3
2,633,518	+		CCNA_02485	0.62	-1.2
2,633,538	+		CCNA_02485	0.64	+1.6
2,633,538	+		CCNA_02485	0.64	-0.6
2,633,546	-		CCNA_02485	0.64	+0.0
2,633,546	-		CCNA_02485	0.64	+0.6
2,633,546	-		CCNA_02485	0.64	-0.8
2,633,546	-		CCNA_02485	0.64	-0.3
2,633,567	-		CCNA_02485	0.66	-1.1
2,633,575	-		CCNA_02485	0.66	-0.3