Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02103

Experiment: PYE with Gentamicin 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Gentamicin 0.0005 mg/ml
2,251,049	-				-2.4
2,251,051	+				-0.5
2,251,059	-				+1.0
2,251,059	-				-0.1
2,251,064	-				-1.2
2,251,072	-				+0.6
2,251,076	-				-2.3
2,251,107	-				-0.6
2,251,107	-				+1.0
2,251,161	+		CCNA_02102	0.15	+0.4
2,251,168	+		CCNA_02102	0.16	+0.4
2,251,168	+		CCNA_02102	0.16	+0.1
2,251,168	+		CCNA_02102	0.16	+0.4
2,251,230	-		CCNA_02102	0.22	-1.7
2,251,267	-		CCNA_02102	0.25	-0.2
2,251,281	+		CCNA_02102	0.26	-2.0
2,251,332	+		CCNA_02102	0.31	+0.1
2,251,366	+		CCNA_02102	0.35	-0.1
2,251,371	+		CCNA_02102	0.35	+0.2
2,251,379	-		CCNA_02102	0.36	-0.9
2,251,379	-		CCNA_02102	0.36	-1.7
2,251,379	-		CCNA_02102	0.36	-0.8
2,251,379	-		CCNA_02102	0.36	-0.3
2,251,379	-		CCNA_02102	0.36	-0.8
2,251,421	+		CCNA_02102	0.40	-1.0
2,251,421	+		CCNA_02102	0.40	-1.4
2,251,421	+		CCNA_02102	0.40	+0.6
2,251,424	-		CCNA_02102	0.40	+0.3
2,251,429	-		CCNA_02102	0.41	+2.3
2,251,444	-		CCNA_02102	0.42	-1.6
2,251,460	+		CCNA_02102	0.44	-1.1
2,251,460	+		CCNA_02102	0.44	+1.0
2,251,460	+		CCNA_02102	0.44	-1.7
2,251,460	+		CCNA_02102	0.44	-1.1
2,251,460	+		CCNA_02102	0.44	-0.9
2,251,468	-		CCNA_02102	0.44	-0.7
2,251,468	-		CCNA_02102	0.44	-0.9
2,251,486	+		CCNA_02102	0.46	-0.2
2,251,504	+		CCNA_02102	0.48	-0.5
2,251,514	+		CCNA_02102	0.49	+0.0
2,251,528	+		CCNA_02102	0.50	-1.1
2,251,530	-		CCNA_02102	0.50	-0.2
2,251,634	-		CCNA_02102	0.60	-0.5
2,251,645	-		CCNA_02102	0.61	-1.3
2,251,650	-		CCNA_02102	0.62	-0.9
2,251,668	-		CCNA_02102	0.64	-2.0
2,251,668	-		CCNA_02102	0.64	-0.3
2,251,688	+		CCNA_02102	0.65	-1.9
2,251,688	+		CCNA_02102	0.65	+0.6
2,251,701	-		CCNA_02102	0.67	+1.3
2,251,839	+				+0.8
2,251,873	-		CCNA_02102	0.83	-1.0
2,251,890	+		CCNA_02102	0.85	+1.0
2,251,895	+		CCNA_02102	0.85	-2.2
2,251,939	+		CCNA_02102	0.89	-2.2
2,251,941	+		CCNA_02102	0.90	+0.6
2,252,013	+				-0.4
2,252,021	-				-1.4
2,252,025	+				-0.7
2,252,042	+				-1.5
2,252,042	+				-0.3
2,252,050	-				-3.1
2,252,072	-				-0.1
2,252,080	+				+1.0
2,252,096	-				+1.9
2,252,096	-				+1.4
2,252,096	-				+2.1
2,252,101	-		CCNA_02103	0.10	+2.8
2,252,118	-		CCNA_02103	0.13	+2.9
2,252,166	-		CCNA_02103	0.22	+2.8
2,252,187	-		CCNA_02103	0.25	+2.9
2,252,187	-		CCNA_02103	0.25	+3.2
2,252,187	-		CCNA_02103	0.25	+2.9
2,252,187	-		CCNA_02103	0.25	+3.1
2,252,370	-		CCNA_02103	0.58	+3.3
2,252,521	-		CCNA_02103	0.85	+3.8
2,252,575	-				+3.6
2,252,608	+				+2.1
2,252,624	-				+0.3
2,252,662	-		CCNA_02104	0.17	-2.6
2,252,691	+		CCNA_02104	0.26	-1.3
2,252,705	+		CCNA_02104	0.30	-0.1
2,252,740	-		CCNA_02104	0.40	-0.9
2,252,754	-		CCNA_02104	0.44	-0.5
2,252,791	-		CCNA_02104	0.55	-0.7
2,252,807	-		CCNA_02104	0.60	-1.1
2,252,826	+		CCNA_02104	0.66	+0.3
2,252,842	+		CCNA_02104	0.71	-0.1
2,252,851	-		CCNA_02104	0.73	-2.1
2,252,895	-		CCNA_02104	0.86	-0.6
2,252,930	+				+0.3
2,253,061	+		CCNA_02105	0.15	-0.2
2,253,091	+		CCNA_02105	0.23	-0.9
2,253,099	-		CCNA_02105	0.25	-0.1
2,253,099	-		CCNA_02105	0.25	+0.7
2,253,099	-		CCNA_02105	0.25	-2.8
2,253,128	-		CCNA_02105	0.33	-0.3
2,253,130	+		CCNA_02105	0.33	-0.6
2,253,130	+		CCNA_02105	0.33	-1.2
2,253,138	-		CCNA_02105	0.35	+0.0
2,253,138	-		CCNA_02105	0.35	+0.8
2,253,148	-		CCNA_02105	0.38	-0.8
2,253,149	+		CCNA_02105	0.38	-1.2
2,253,215	-		CCNA_02105	0.55	+0.4
2,253,258	-		CCNA_02105	0.66	-0.5
2,253,268	-		CCNA_02105	0.69	-0.5
2,253,276	-		CCNA_02105	0.71	-2.1
2,253,289	+		CCNA_02105	0.74	+0.0
2,253,324	-		CCNA_02105	0.83	+1.3
2,253,326	+		CCNA_02105	0.84	-1.1
2,253,326	+		CCNA_02105	0.84	+0.5
2,253,331	+				+4.2
2,253,340	+		CCNA_02105	0.87	-0.2
2,253,348	-		CCNA_02105	0.89	+0.5
2,253,348	-		CCNA_02105	0.89	-1.0
2,253,354	+				+2.6
2,253,362	-				+0.4
2,253,426	+				+0.1
2,253,426	+				-1.8
2,253,452	-				-0.5
2,253,454	-				-0.1
2,253,454	-				+1.4
2,253,454	-				+0.0
2,253,488	-				-1.6
2,253,587	+				-0.5