Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02028
Experiment: PYE with Gentamicin 0.0005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | PYE with Gentamicin 0.0005 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,172,978 | - | CCNA_02025 | 0.81 | +2.1 | |
2,172,978 | - | CCNA_02025 | 0.81 | +3.2 | |
2,173,002 | - | +4.4 | |||
2,173,185 | - | CCNA_02026 | 0.71 | +3.8 | |
2,173,185 | - | CCNA_02026 | 0.71 | +5.8 | |
2,173,220 | - | CCNA_02026 | 0.87 | +5.7 | |
2,173,234 | - | +2.6 | |||
2,173,948 | - | +5.8 | |||
2,174,000 | - | CCNA_02028 | 0.20 | +5.9 | |
2,174,159 | - | CCNA_02028 | 0.68 | +5.5 |
Or see this region's nucleotide sequence