Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01774

Experiment: PYE with Gentamicin 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Gentamicin 0.0005 mg/ml
1,899,171	+		CCNA_01772	0.36	-0.0
1,899,179	-		CCNA_01772	0.38	+1.2
1,899,179	-		CCNA_01772	0.38	-0.2
1,899,202	+		CCNA_01772	0.44	-0.4
1,899,220	-		CCNA_01772	0.49	-0.1
1,899,269	+		CCNA_01772	0.62	+0.1
1,899,274	+		CCNA_01772	0.63	+1.5
1,899,274	+		CCNA_01772	0.63	+0.8
1,899,282	-		CCNA_01772	0.65	-1.1
1,899,282	-		CCNA_01772	0.65	-0.1
1,899,282	-		CCNA_01772	0.65	-0.3
1,899,284	+		CCNA_01772	0.66	+0.1
1,899,292	-		CCNA_01772	0.68	+0.8
1,899,292	-		CCNA_01772	0.68	-0.4
1,899,329	-		CCNA_01772	0.78	-0.5
1,899,387	-				-1.8
1,899,387	-				+0.7
1,899,407	+				+0.0
1,899,407	+				+2.0
1,899,412	+				-1.4
1,899,415	-				+0.8
1,899,415	-				+2.2
1,899,415	-				+0.4
1,899,420	-				-0.3
1,899,420	-				+0.5
1,899,420	-				-0.8
1,899,525	-		CCNA_01773	0.19	+1.6
1,899,563	+		CCNA_01773	0.25	+0.6
1,899,563	+		CCNA_01773	0.25	-0.3
1,899,571	-		CCNA_01773	0.26	+0.9
1,899,616	-		CCNA_01773	0.33	-0.5
1,899,619	+		CCNA_01773	0.34	-1.8
1,899,627	-		CCNA_01773	0.35	+0.6
1,899,634	+		CCNA_01773	0.36	-2.1
1,899,641	-		CCNA_01773	0.38	-0.5
1,899,711	+		CCNA_01773	0.49	-0.1
1,899,729	+		CCNA_01773	0.52	-0.3
1,899,785	-		CCNA_01773	0.61	+0.3
1,899,819	+		CCNA_01773	0.66	+2.2
1,899,835	-		CCNA_01773	0.69	-0.3
1,899,840	-		CCNA_01773	0.70	+0.2
1,899,850	-		CCNA_01773	0.71	-1.5
1,899,850	-		CCNA_01773	0.71	+0.7
1,899,891	+		CCNA_01773	0.78	+0.1
1,899,891	+		CCNA_01773	0.78	-1.2
1,899,925	+		CCNA_01773	0.83	-1.6
1,899,936	+		CCNA_01773	0.85	+0.9
1,899,943	-		CCNA_01773	0.86	+0.2
1,899,953	-				+2.0
1,900,003	+				+0.2
1,900,031	+				-0.6
1,900,096	-				-1.6
1,900,115	+				+1.4
1,900,133	-				+0.5
1,900,277	+		CCNA_01774	0.30	-0.1
1,900,352	+		CCNA_01774	0.42	+0.7
1,900,371	+		CCNA_01774	0.46	+1.0
1,900,468	+		CCNA_01774	0.62	+0.9
1,900,476	-				+3.4
1,900,543	+		CCNA_01774	0.75	-0.7
1,900,583	-		CCNA_01774	0.82	+0.2
1,900,701	-				+1.3
1,900,800	-				+1.4
1,900,819	+				-1.2
1,900,845	+				-0.4
1,900,845	+				-0.5
1,900,845	+				-0.4
1,900,851	+				+0.2
1,900,853	-				+1.7
1,900,853	-				+2.1
1,900,859	-				+1.8
1,900,878	-				+2.5
1,900,900	-				+2.2
1,901,000	+		CCNA_01775	0.15	+0.1
1,901,034	+		CCNA_01775	0.18	+0.6
1,901,216	-		CCNA_01775	0.36	+1.3
1,901,238	+		CCNA_01775	0.38	+1.2
1,901,243	+		CCNA_01775	0.39	-1.0
1,901,251	-		CCNA_01775	0.39	+2.4
1,901,257	-		CCNA_01775	0.40	+2.7
1,901,304	+		CCNA_01775	0.45	-0.9
1,901,317	-		CCNA_01775	0.46	+2.2
1,901,332	-		CCNA_01775	0.47	+1.8
1,901,396	+		CCNA_01775	0.54	+1.0
1,901,488	-		CCNA_01775	0.62	+2.6
1,901,513	-		CCNA_01775	0.65	+0.3
1,901,599	-		CCNA_01775	0.73	+2.2
1,901,616	-		CCNA_01775	0.75	+0.4
1,901,656	+		CCNA_01775	0.79	-0.4
1,901,682	+		CCNA_01775	0.81	-0.2