Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01581

Experiment: PYE with Gentamicin 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Gentamicin 0.0005 mg/ml
1,696,675	+				+0.4
1,696,675	+				-1.4
1,696,675	+				-0.9
1,696,679	-				+1.6
1,696,712	+				-0.1
1,696,712	+				-0.7
1,696,720	-				-1.8
1,696,770	+				+1.8
1,696,837	+				+1.2
1,696,837	+				+1.3
1,696,837	+				+0.8
1,696,837	+				+0.9
1,696,849	+				+1.4
1,696,990	+		CCNA_01580	0.16	+2.4
1,696,995	-		CCNA_01580	0.17	+0.5
1,696,997	+		CCNA_01580	0.18	+1.1
1,697,053	-		CCNA_01580	0.26	+0.2
1,697,065	+		CCNA_01580	0.28	+0.8
1,697,091	+		CCNA_01580	0.32	+1.6
1,697,091	+		CCNA_01580	0.32	+2.4
1,697,091	+		CCNA_01580	0.32	+1.2
1,697,094	-		CCNA_01580	0.32	+1.2
1,697,098	+		CCNA_01580	0.33	+1.2
1,697,099	-		CCNA_01580	0.33	-0.5
1,697,147	-		CCNA_01580	0.41	+1.4
1,697,159	+		CCNA_01580	0.42	-0.2
1,697,182	+		CCNA_01580	0.46	+1.8
1,697,182	+		CCNA_01580	0.46	+1.8
1,697,216	+		CCNA_01580	0.51	+1.0
1,697,238	+		CCNA_01580	0.55	+1.6
1,697,246	-		CCNA_01580	0.56	-1.0
1,697,246	-		CCNA_01580	0.56	-0.2
1,697,246	-		CCNA_01580	0.56	-1.0
1,697,270	+		CCNA_01580	0.59	+2.1
1,697,277	+		CCNA_01580	0.61	+1.4
1,697,278	-		CCNA_01580	0.61	+0.8
1,697,278	-		CCNA_01580	0.61	+1.8
1,697,545	+				+1.8
1,697,584	+				+0.2
1,697,612	-				+2.4
1,697,634	+				+1.8
1,697,634	+				+0.8
1,697,644	-				-0.7
1,697,644	-				+0.5
1,697,651	+				-1.8
1,697,669	+				-0.9
1,697,760	+		CCNA_01581	0.35	+1.2
1,697,773	-		CCNA_01581	0.39	-0.7
1,697,829	-		CCNA_01581	0.56	-1.5
1,697,850	-		CCNA_01581	0.62	-0.7
1,697,850	-		CCNA_01581	0.62	-0.6
1,698,002	-				-1.1
1,698,018	+				-1.7
1,698,018	+				-0.0
1,698,126	+		CCNA_01582	0.10	-1.0
1,698,136	+		CCNA_01582	0.13	+0.5
1,698,237	-		CCNA_01582	0.41	+2.2
1,698,389	-		CCNA_01582	0.83	-1.1
1,698,396	-		CCNA_01582	0.85	+0.0
1,698,406	+		CCNA_01582	0.87	+0.1
1,698,421	+				-1.0
1,698,429	-				+1.4
1,698,721	-		CCNA_01583	0.19	+2.1
1,698,721	-		CCNA_01583	0.19	+0.4
1,698,762	+		CCNA_01583	0.23	+1.7
1,698,895	-		CCNA_01583	0.36	+2.9