Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01210

Experiment: PYE with Gentamicin 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Gentamicin 0.0005 mg/ml
1,335,923	-		CCNA_01209	0.38	-0.1
1,335,923	-		CCNA_01209	0.38	+0.3
1,335,923	-		CCNA_01209	0.38	+0.2
1,335,951	-		CCNA_01209	0.40	-1.0
1,335,991	+		CCNA_01209	0.44	+3.7
1,336,113	+		CCNA_01209	0.54	-0.1
1,336,114	+		CCNA_01209	0.54	+0.4
1,336,114	+		CCNA_01209	0.54	-1.1
1,336,114	+		CCNA_01209	0.54	-1.3
1,336,122	-		CCNA_01209	0.55	-1.8
1,336,122	-		CCNA_01209	0.55	-0.6
1,336,122	-		CCNA_01209	0.55	-1.4
1,336,122	-		CCNA_01209	0.55	-1.5
1,336,166	+		CCNA_01209	0.59	-0.9
1,336,260	+		CCNA_01209	0.67	-0.1
1,336,268	-		CCNA_01209	0.68	+1.2
1,336,268	-		CCNA_01209	0.68	-0.4
1,336,278	+		CCNA_01209	0.69	-0.7
1,336,281	-		CCNA_01209	0.69	+0.5
1,336,331	-		CCNA_01209	0.73	+0.2
1,336,333	+		CCNA_01209	0.73	-1.7
1,336,341	-		CCNA_01209	0.74	-0.3
1,336,346	-		CCNA_01209	0.75	+1.2
1,336,420	+		CCNA_01209	0.81	-0.3
1,336,420	+		CCNA_01209	0.81	+0.4
1,336,420	+		CCNA_01209	0.81	-0.3
1,336,420	+		CCNA_01209	0.81	-0.6
1,336,428	-		CCNA_01209	0.82	-0.5
1,336,428	-		CCNA_01209	0.82	-0.1
1,336,428	-		CCNA_01209	0.82	-0.3
1,336,482	+		CCNA_01209	0.86	+0.6
1,336,484	+		CCNA_01209	0.87	-0.3
1,336,484	-		CCNA_01209	0.87	-0.3
1,336,485	-		CCNA_01209	0.87	+0.9
1,336,492	-		CCNA_01209	0.87	-1.3
1,336,492	-		CCNA_01209	0.87	+0.4
1,336,557	+				-0.2
1,336,564	+				-1.5
1,336,564	+				-0.3
1,336,572	-				-0.8
1,336,572	-				+1.0
1,336,572	-				+0.3
1,336,572	-				-1.2
1,336,588	+				+0.7
1,336,601	+				-2.0
1,336,601	+				+1.0
1,336,633	+				-0.9
1,336,633	+				+0.3
1,336,633	+				-0.8
1,336,633	+				+0.6
1,336,633	+				-0.5
1,336,633	+				-0.1
1,336,633	+				-0.7
1,336,641	-				-1.7
1,336,641	-				-0.7
1,336,641	-				+0.0
1,336,641	-				+0.5
1,336,641	-				+0.3
1,336,729	+				-1.0
1,336,737	-				-2.5
1,336,743	+				+0.4
1,336,784	+				-0.7
1,336,813	+				+0.8
1,336,881	-				-0.9
1,336,897	+				+1.4
1,336,905	-				+1.4
1,336,951	+		CCNA_01210	0.11	-0.3
1,337,055	+		CCNA_01210	0.25	+1.7
1,337,062	-		CCNA_01210	0.26	-0.3
1,337,142	+		CCNA_01210	0.36	+0.2
1,337,144	+		CCNA_01210	0.37	-0.7
1,337,248	+		CCNA_01210	0.50	-0.6
1,337,530	+		CCNA_01210	0.87	+0.3
1,337,600	-				-0.6
1,337,619	+				+1.8
1,337,650	-				+1.2
1,337,724	+				+1.4
1,337,729	-				-0.6
1,337,734	-				-1.1
1,337,738	+				+3.9
1,338,561	-		CCNA_01211	0.88	+1.1
1,338,602	-				-0.7
1,338,602	-				-1.7
1,338,602	-				+0.0
1,338,602	-				+1.2
1,338,602	-				-0.0
1,338,602	-				-0.1
1,338,602	-				+1.7
1,338,602	-				-0.1
1,338,602	-				-0.3
1,338,602	-				-1.2