Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01176

Experiment: PYE with Gentamicin 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Gentamicin 0.0005 mg/ml
1,294,637	+				+0.7
1,294,637	+				-0.3
1,294,645	-				-0.8
1,294,675	+				-2.1
1,294,675	+				-1.7
1,294,709	+				+1.1
1,294,788	+				+0.3
1,294,809	-		CCNA_01175	0.10	+1.7
1,294,877	+		CCNA_01175	0.18	-0.1
1,294,877	+		CCNA_01175	0.18	-0.4
1,294,916	+		CCNA_01175	0.22	-0.7
1,294,921	+		CCNA_01175	0.23	-0.3
1,294,943	-		CCNA_01175	0.25	+1.1
1,294,944	-		CCNA_01175	0.25	+0.9
1,294,948	-		CCNA_01175	0.26	-0.0
1,294,954	-		CCNA_01175	0.26	+0.2
1,294,981	-		CCNA_01175	0.29	+0.5
1,294,989	+		CCNA_01175	0.30	+0.8
1,295,009	+		CCNA_01175	0.32	-1.7
1,295,035	+		CCNA_01175	0.35	-1.7
1,295,112	+		CCNA_01175	0.43	-0.2
1,295,168	+		CCNA_01175	0.49	+0.3
1,295,168	+		CCNA_01175	0.49	-1.2
1,295,238	+		CCNA_01175	0.57	+0.2
1,295,356	+		CCNA_01175	0.70	+1.0
1,295,412	+		CCNA_01175	0.76	+0.6
1,295,436	+		CCNA_01175	0.78	+1.8
1,295,466	-		CCNA_01175	0.82	+0.7
1,295,542	-		CCNA_01175	0.90	-2.1
1,295,582	+				+0.5
1,295,595	-				-1.6
1,295,601	-				-0.6
1,295,616	+				+0.4
1,295,624	-				+1.0
1,295,624	-				+0.6
1,295,634	-				+0.9
1,295,698	+		CCNA_01176	0.18	-0.8
1,295,743	+		CCNA_01176	0.31	+1.1
1,295,783	-		CCNA_01176	0.42	-0.2
1,295,836	-		CCNA_01176	0.57	-0.6
1,295,931	+		CCNA_01176	0.83	+1.4
1,295,966	+				-1.3
1,295,974	-				-1.0
1,295,996	+				-0.3
1,296,102	+				+0.5
1,296,102	+				+0.2
1,296,110	-				+0.5
1,296,110	-				+0.1
1,296,134	+				+0.6
1,296,147	+				+0.2
1,296,149	+				-0.8
1,296,149	+				+0.5
1,296,216	+				+1.7
1,296,237	+		CCNA_01177	0.14	-1.1
1,296,237	+		CCNA_01177	0.14	+0.5
1,296,237	+		CCNA_01177	0.14	+0.9
1,296,281	-		CCNA_01177	0.17	-0.7
1,296,360	+		CCNA_01177	0.22	+0.6
1,296,384	+		CCNA_01177	0.23	-0.8
1,296,384	+		CCNA_01177	0.23	-0.1
1,296,385	+		CCNA_01177	0.23	-0.3
1,296,426	+		CCNA_01177	0.26	-0.9
1,296,525	-		CCNA_01177	0.32	+0.8
1,296,562	-		CCNA_01177	0.34	+0.9
1,296,562	-		CCNA_01177	0.34	+0.7
1,296,571	+		CCNA_01177	0.35	+0.7
1,296,590	+		CCNA_01177	0.36	+1.1
1,296,590	+		CCNA_01177	0.36	-2.9
1,296,590	+		CCNA_01177	0.36	+1.1
1,296,590	+		CCNA_01177	0.36	+1.5
1,296,598	-		CCNA_01177	0.36	+0.1
1,296,598	-		CCNA_01177	0.36	-0.4
1,296,598	-		CCNA_01177	0.36	-0.1
1,296,816	+		CCNA_01177	0.49	-1.2
1,296,845	+		CCNA_01177	0.51	-1.5
1,296,896	-		CCNA_01177	0.54	+0.1
1,296,988	+		CCNA_01177	0.60	+0.5