Experiment: Cobalt chloride 0.4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4219 and Ac3H11_4220 are separated by 322 nucleotides Ac3H11_4220 and Ac3H11_4221 overlap by 22 nucleotides
Ac3H11_4219 - hypothetical protein, at 489,330 to 489,467
_4219
Ac3H11_4220 - hypothetical protein, at 489,790 to 489,918
_4220
Ac3H11_4221 - Permease of the drug/metabolite transporter (DMT) superfamily, at 489,897 to 491,093
_4221
Position (kb) 489
490 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 488.808 kb on - strand at 488.816 kb on + strand at 488.816 kb on + strand at 488.816 kb on + strand at 488.817 kb on - strand at 488.817 kb on - strand at 488.817 kb on - strand at 488.817 kb on - strand at 488.817 kb on - strand at 488.903 kb on + strand at 488.903 kb on + strand at 488.903 kb on + strand at 488.904 kb on - strand at 488.904 kb on - strand at 489.015 kb on + strand at 489.015 kb on + strand at 489.016 kb on - strand at 489.021 kb on + strand at 489.021 kb on + strand at 489.021 kb on + strand at 489.112 kb on + strand at 489.113 kb on - strand at 489.115 kb on - strand at 489.115 kb on - strand at 489.172 kb on + strand at 489.172 kb on + strand at 489.172 kb on + strand at 489.173 kb on - strand at 489.173 kb on - strand at 489.173 kb on - strand at 489.243 kb on + strand at 489.244 kb on - strand at 489.244 kb on - strand at 489.244 kb on - strand at 489.302 kb on + strand at 489.302 kb on + strand at 489.423 kb on + strand, within Ac3H11_4219 at 489.424 kb on - strand, within Ac3H11_4219 at 489.424 kb on - strand, within Ac3H11_4219 at 489.424 kb on - strand, within Ac3H11_4219 at 489.504 kb on + strand at 489.504 kb on + strand at 489.513 kb on + strand at 489.514 kb on - strand at 489.514 kb on - strand at 489.560 kb on - strand at 489.560 kb on - strand at 489.560 kb on - strand at 489.560 kb on - strand at 489.560 kb on - strand at 489.562 kb on + strand at 489.562 kb on + strand at 489.695 kb on + strand at 489.695 kb on + strand at 489.695 kb on + strand at 489.695 kb on + strand at 489.770 kb on - strand at 489.794 kb on + strand at 489.794 kb on + strand at 489.795 kb on - strand at 489.795 kb on - strand at 489.827 kb on + strand, within Ac3H11_4220 at 489.827 kb on + strand, within Ac3H11_4220 at 489.828 kb on - strand, within Ac3H11_4220 at 489.828 kb on - strand, within Ac3H11_4220 at 490.064 kb on + strand, within Ac3H11_4221 at 490.064 kb on + strand, within Ac3H11_4221 at 490.064 kb on + strand, within Ac3H11_4221 at 490.064 kb on + strand, within Ac3H11_4221 at 490.065 kb on - strand, within Ac3H11_4221 at 490.065 kb on - strand, within Ac3H11_4221 at 490.065 kb on - strand, within Ac3H11_4221 at 490.065 kb on - strand, within Ac3H11_4221 at 490.065 kb on - strand, within Ac3H11_4221 at 490.414 kb on + strand, within Ac3H11_4221 at 490.443 kb on + strand, within Ac3H11_4221 at 490.443 kb on + strand, within Ac3H11_4221 at 490.729 kb on + strand, within Ac3H11_4221 at 490.729 kb on + strand, within Ac3H11_4221 at 490.730 kb on - strand, within Ac3H11_4221
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.4 mM remove 488,808 - -0.4 488,816 + +3.0 488,816 + -0.4 488,816 + +0.1 488,817 - +1.3 488,817 - -0.2 488,817 - +0.5 488,817 - +0.1 488,817 - +0.6 488,903 + -0.2 488,903 + -0.0 488,903 + -0.4 488,904 - -0.1 488,904 - -0.4 489,015 + +0.3 489,015 + -0.3 489,016 - -0.9 489,021 + +1.4 489,021 + -1.4 489,021 + -0.1 489,112 + +0.4 489,113 - -0.1 489,115 - -0.0 489,115 - +0.4 489,172 + -0.2 489,172 + +0.9 489,172 + +0.0 489,173 - -0.2 489,173 - +0.6 489,173 - -0.1 489,243 + -0.1 489,244 - -0.8 489,244 - -0.5 489,244 - +0.4 489,302 + +1.4 489,302 + -0.3 489,423 + Ac3H11_4219 0.67 -0.4 489,424 - Ac3H11_4219 0.68 -1.0 489,424 - Ac3H11_4219 0.68 +0.0 489,424 - Ac3H11_4219 0.68 -0.4 489,504 + -0.8 489,504 + -0.3 489,513 + -0.7 489,514 - +0.9 489,514 - -0.8 489,560 - -0.4 489,560 - +0.8 489,560 - +0.9 489,560 - -1.2 489,560 - +0.9 489,562 + +1.0 489,562 + -0.3 489,695 + +1.7 489,695 + +0.6 489,695 + +1.1 489,695 + -1.3 489,770 - +1.7 489,794 + -0.1 489,794 + -0.1 489,795 - -0.1 489,795 - +0.3 489,827 + Ac3H11_4220 0.29 -0.5 489,827 + Ac3H11_4220 0.29 -0.3 489,828 - Ac3H11_4220 0.29 +0.5 489,828 - Ac3H11_4220 0.29 +0.0 490,064 + Ac3H11_4221 0.14 -1.4 490,064 + Ac3H11_4221 0.14 -0.4 490,064 + Ac3H11_4221 0.14 +1.3 490,064 + Ac3H11_4221 0.14 -0.6 490,065 - Ac3H11_4221 0.14 +2.1 490,065 - Ac3H11_4221 0.14 +0.4 490,065 - Ac3H11_4221 0.14 +0.9 490,065 - Ac3H11_4221 0.14 -2.4 490,065 - Ac3H11_4221 0.14 -1.0 490,414 + Ac3H11_4221 0.43 -0.3 490,443 + Ac3H11_4221 0.46 -0.7 490,443 + Ac3H11_4221 0.46 -0.2 490,729 + Ac3H11_4221 0.70 +0.8 490,729 + Ac3H11_4221 0.70 -0.7 490,730 - Ac3H11_4221 0.70 +0.1
Or see this region's nucleotide sequence