Experiment: Cobalt chloride 0.4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3522 and Ac3H11_3523 are separated by 200 nucleotides Ac3H11_3523 and Ac3H11_3524 are separated by 192 nucleotides
Ac3H11_3522 - Fumarylacetoacetate hydrolase family protein, at 66,794 to 68,011
_3522
Ac3H11_3523 - Xylonate dehydratase (EC 4.2.1.82), at 68,212 to 69,993
_3523
Ac3H11_3524 - TRAP-type C4-dicarboxylate transport system, periplasmic component, at 70,186 to 71,193
_3524
Position (kb)
68
69
70 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 67.404 kb on - strand, within Ac3H11_3522 at 67.468 kb on - strand, within Ac3H11_3522 at 67.468 kb on - strand, within Ac3H11_3522 at 67.767 kb on + strand, within Ac3H11_3522 at 67.768 kb on - strand, within Ac3H11_3522 at 67.837 kb on - strand, within Ac3H11_3522 at 68.011 kb on + strand at 68.011 kb on + strand at 68.011 kb on + strand at 68.011 kb on + strand at 68.700 kb on - strand, within Ac3H11_3523 at 69.080 kb on + strand, within Ac3H11_3523 at 69.199 kb on - strand, within Ac3H11_3523 at 69.199 kb on - strand, within Ac3H11_3523 at 69.199 kb on - strand, within Ac3H11_3523 at 69.245 kb on + strand, within Ac3H11_3523 at 69.245 kb on + strand, within Ac3H11_3523 at 69.279 kb on - strand, within Ac3H11_3523 at 69.650 kb on + strand, within Ac3H11_3523 at 69.651 kb on - strand, within Ac3H11_3523 at 69.674 kb on + strand, within Ac3H11_3523 at 69.893 kb on + strand at 70.019 kb on + strand at 70.259 kb on + strand at 70.260 kb on - strand at 70.260 kb on - strand at 70.493 kb on + strand, within Ac3H11_3524 at 70.493 kb on + strand, within Ac3H11_3524 at 70.493 kb on + strand, within Ac3H11_3524 at 70.493 kb on + strand, within Ac3H11_3524 at 70.494 kb on - strand, within Ac3H11_3524 at 70.494 kb on - strand, within Ac3H11_3524 at 70.494 kb on - strand, within Ac3H11_3524 at 70.494 kb on - strand, within Ac3H11_3524 at 70.494 kb on - strand, within Ac3H11_3524 at 70.494 kb on - strand, within Ac3H11_3524 at 70.494 kb on - strand, within Ac3H11_3524 at 70.532 kb on + strand, within Ac3H11_3524 at 70.532 kb on + strand, within Ac3H11_3524 at 70.532 kb on + strand, within Ac3H11_3524 at 70.532 kb on + strand, within Ac3H11_3524 at 70.532 kb on + strand, within Ac3H11_3524 at 70.533 kb on - strand, within Ac3H11_3524 at 70.605 kb on - strand, within Ac3H11_3524
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.4 mM remove 67,404 - Ac3H11_3522 0.50 +0.5 67,468 - Ac3H11_3522 0.55 +0.7 67,468 - Ac3H11_3522 0.55 -1.0 67,767 + Ac3H11_3522 0.80 +0.0 67,768 - Ac3H11_3522 0.80 +0.0 67,837 - Ac3H11_3522 0.86 -0.1 68,011 + +0.4 68,011 + +0.8 68,011 + -0.0 68,011 + +0.2 68,700 - Ac3H11_3523 0.27 +1.1 69,080 + Ac3H11_3523 0.49 -0.4 69,199 - Ac3H11_3523 0.55 +0.1 69,199 - Ac3H11_3523 0.55 +0.1 69,199 - Ac3H11_3523 0.55 -0.2 69,245 + Ac3H11_3523 0.58 +0.7 69,245 + Ac3H11_3523 0.58 -1.6 69,279 - Ac3H11_3523 0.60 -0.1 69,650 + Ac3H11_3523 0.81 +2.1 69,651 - Ac3H11_3523 0.81 -1.3 69,674 + Ac3H11_3523 0.82 -0.4 69,893 + +0.7 70,019 + +0.8 70,259 + +1.2 70,260 - -0.6 70,260 - +0.4 70,493 + Ac3H11_3524 0.30 +2.2 70,493 + Ac3H11_3524 0.30 -0.4 70,493 + Ac3H11_3524 0.30 -0.0 70,493 + Ac3H11_3524 0.30 -0.8 70,494 - Ac3H11_3524 0.31 -1.8 70,494 - Ac3H11_3524 0.31 +0.4 70,494 - Ac3H11_3524 0.31 +0.3 70,494 - Ac3H11_3524 0.31 +1.3 70,494 - Ac3H11_3524 0.31 +0.2 70,494 - Ac3H11_3524 0.31 -1.8 70,494 - Ac3H11_3524 0.31 -0.3 70,532 + Ac3H11_3524 0.34 -0.1 70,532 + Ac3H11_3524 0.34 +1.2 70,532 + Ac3H11_3524 0.34 +1.0 70,532 + Ac3H11_3524 0.34 -2.0 70,532 + Ac3H11_3524 0.34 +0.1 70,533 - Ac3H11_3524 0.34 -0.7 70,605 - Ac3H11_3524 0.42 +0.1
Or see this region's nucleotide sequence