Experiment: Cobalt chloride 0.4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2782 and Ac3H11_2783 overlap by 4 nucleotides Ac3H11_2783 and Ac3H11_2784 are separated by 119 nucleotides Ac3H11_2784 and Ac3H11_2785 are separated by 427 nucleotides
Ac3H11_2782 - L-carnitine dehydratase/bile acid-inducible protein F, at 1,086,699 to 1,087,835
_2782
Ac3H11_2783 - Citrate synthase (si) (EC 2.3.3.1), at 1,087,832 to 1,088,641
_2783
Ac3H11_2784 - Cyn operon transcriptional activator, at 1,088,761 to 1,089,669
_2784
Ac3H11_2785 - GCN5-related N-acetyltransferase, at 1,090,097 to 1,090,618
_2785
Position (kb)
1088
1089
1090 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1087.875 kb on + strand at 1087.875 kb on + strand at 1087.875 kb on + strand at 1087.902 kb on + strand at 1087.902 kb on + strand at 1087.902 kb on + strand at 1087.902 kb on + strand at 1087.902 kb on + strand at 1087.902 kb on + strand at 1087.902 kb on + strand at 1087.903 kb on - strand at 1087.903 kb on - strand at 1087.903 kb on - strand at 1087.903 kb on - strand at 1087.908 kb on + strand at 1087.908 kb on + strand at 1087.908 kb on + strand at 1087.908 kb on + strand at 1087.909 kb on - strand at 1087.909 kb on - strand at 1087.909 kb on - strand at 1087.909 kb on - strand at 1088.009 kb on + strand, within Ac3H11_2783 at 1088.009 kb on + strand, within Ac3H11_2783 at 1088.009 kb on + strand, within Ac3H11_2783 at 1088.009 kb on + strand, within Ac3H11_2783 at 1088.010 kb on - strand, within Ac3H11_2783 at 1088.067 kb on + strand, within Ac3H11_2783 at 1088.067 kb on + strand, within Ac3H11_2783 at 1088.112 kb on + strand, within Ac3H11_2783 at 1088.112 kb on + strand, within Ac3H11_2783 at 1088.112 kb on + strand, within Ac3H11_2783 at 1088.112 kb on + strand, within Ac3H11_2783 at 1088.113 kb on - strand, within Ac3H11_2783 at 1088.400 kb on + strand, within Ac3H11_2783 at 1088.401 kb on - strand, within Ac3H11_2783 at 1088.491 kb on + strand, within Ac3H11_2783 at 1088.491 kb on + strand, within Ac3H11_2783 at 1088.715 kb on + strand at 1088.747 kb on - strand at 1088.782 kb on + strand at 1088.782 kb on + strand at 1088.783 kb on - strand at 1088.867 kb on + strand, within Ac3H11_2784 at 1088.868 kb on - strand, within Ac3H11_2784 at 1088.868 kb on - strand, within Ac3H11_2784 at 1089.142 kb on - strand, within Ac3H11_2784 at 1089.474 kb on + strand, within Ac3H11_2784 at 1089.474 kb on + strand, within Ac3H11_2784 at 1089.474 kb on + strand, within Ac3H11_2784 at 1089.474 kb on + strand, within Ac3H11_2784 at 1089.474 kb on + strand, within Ac3H11_2784 at 1089.474 kb on + strand, within Ac3H11_2784 at 1089.475 kb on - strand, within Ac3H11_2784 at 1089.475 kb on - strand, within Ac3H11_2784 at 1089.475 kb on - strand, within Ac3H11_2784 at 1089.475 kb on - strand, within Ac3H11_2784 at 1089.563 kb on + strand, within Ac3H11_2784 at 1089.668 kb on - strand at 1089.704 kb on + strand at 1089.752 kb on - strand at 1089.805 kb on - strand at 1089.850 kb on + strand at 1089.850 kb on + strand at 1089.988 kb on + strand at 1089.988 kb on + strand at 1089.988 kb on + strand at 1089.989 kb on - strand at 1089.989 kb on - strand at 1089.989 kb on - strand at 1090.035 kb on - strand at 1090.140 kb on + strand at 1090.141 kb on - strand at 1090.191 kb on + strand, within Ac3H11_2785 at 1090.251 kb on + strand, within Ac3H11_2785 at 1090.251 kb on + strand, within Ac3H11_2785 at 1090.251 kb on + strand, within Ac3H11_2785 at 1090.252 kb on - strand, within Ac3H11_2785 at 1090.252 kb on - strand, within Ac3H11_2785 at 1090.580 kb on + strand at 1090.581 kb on - strand at 1090.624 kb on - strand at 1090.632 kb on + strand at 1090.632 kb on + strand at 1090.632 kb on + strand at 1090.632 kb on + strand at 1090.633 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.4 mM remove 1,087,875 + -0.3 1,087,875 + -0.5 1,087,875 + -0.9 1,087,902 + -0.2 1,087,902 + +0.0 1,087,902 + +0.7 1,087,902 + +1.7 1,087,902 + +0.2 1,087,902 + -0.4 1,087,902 + +0.3 1,087,903 - -1.1 1,087,903 - -1.7 1,087,903 - -3.2 1,087,903 - +1.0 1,087,908 + -0.8 1,087,908 + -0.7 1,087,908 + -1.6 1,087,908 + +0.3 1,087,909 - -0.4 1,087,909 - +0.2 1,087,909 - +0.3 1,087,909 - -0.1 1,088,009 + Ac3H11_2783 0.22 +1.1 1,088,009 + Ac3H11_2783 0.22 +0.3 1,088,009 + Ac3H11_2783 0.22 +0.4 1,088,009 + Ac3H11_2783 0.22 -1.1 1,088,010 - Ac3H11_2783 0.22 -0.6 1,088,067 + Ac3H11_2783 0.29 +1.0 1,088,067 + Ac3H11_2783 0.29 +0.8 1,088,112 + Ac3H11_2783 0.35 -1.1 1,088,112 + Ac3H11_2783 0.35 +1.2 1,088,112 + Ac3H11_2783 0.35 +1.0 1,088,112 + Ac3H11_2783 0.35 -0.6 1,088,113 - Ac3H11_2783 0.35 +0.5 1,088,400 + Ac3H11_2783 0.70 +0.2 1,088,401 - Ac3H11_2783 0.70 +0.4 1,088,491 + Ac3H11_2783 0.81 +2.1 1,088,491 + Ac3H11_2783 0.81 -0.3 1,088,715 + +0.4 1,088,747 - -0.7 1,088,782 + +0.3 1,088,782 + +0.4 1,088,783 - -1.2 1,088,867 + Ac3H11_2784 0.12 +1.1 1,088,868 - Ac3H11_2784 0.12 +0.2 1,088,868 - Ac3H11_2784 0.12 -1.2 1,089,142 - Ac3H11_2784 0.42 +0.7 1,089,474 + Ac3H11_2784 0.78 +0.2 1,089,474 + Ac3H11_2784 0.78 +0.6 1,089,474 + Ac3H11_2784 0.78 +0.1 1,089,474 + Ac3H11_2784 0.78 +1.3 1,089,474 + Ac3H11_2784 0.78 +0.8 1,089,474 + Ac3H11_2784 0.78 +0.3 1,089,475 - Ac3H11_2784 0.79 -0.9 1,089,475 - Ac3H11_2784 0.79 -0.7 1,089,475 - Ac3H11_2784 0.79 +1.3 1,089,475 - Ac3H11_2784 0.79 +1.7 1,089,563 + Ac3H11_2784 0.88 -1.7 1,089,668 - -0.3 1,089,704 + -0.7 1,089,752 - -0.3 1,089,805 - +2.9 1,089,850 + -0.0 1,089,850 + +1.4 1,089,988 + +2.3 1,089,988 + +2.5 1,089,988 + -1.9 1,089,989 - +0.2 1,089,989 - +1.8 1,089,989 - -0.2 1,090,035 - -0.5 1,090,140 + -0.1 1,090,141 - +0.9 1,090,191 + Ac3H11_2785 0.18 -1.6 1,090,251 + Ac3H11_2785 0.30 -0.2 1,090,251 + Ac3H11_2785 0.30 -0.0 1,090,251 + Ac3H11_2785 0.30 +0.8 1,090,252 - Ac3H11_2785 0.30 +1.4 1,090,252 - Ac3H11_2785 0.30 -2.7 1,090,580 + -0.1 1,090,581 - -1.1 1,090,624 - +0.9 1,090,632 + -0.2 1,090,632 + +0.4 1,090,632 + -0.4 1,090,632 + +1.1 1,090,633 - +0.4
Or see this region's nucleotide sequence