Experiment: Cobalt chloride 0.4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1530 and Ac3H11_1531 are separated by 337 nucleotides Ac3H11_1531 and Ac3H11_1532 are separated by 53 nucleotides Ac3H11_1532 and Ac3H11_1533 overlap by 4 nucleotides
Ac3H11_1530 - Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11), at 105,965 to 107,122
_1530
Ac3H11_1531 - Translation initiation factor 2, at 107,460 to 110,045
_1531
Ac3H11_1532 - tRNA pseudouridine synthase A (EC 4.2.1.70), at 110,099 to 110,920
_1532
Ac3H11_1533 - Phosphoribosylanthranilate isomerase (EC 5.3.1.24), at 110,917 to 111,678
_1533
Position (kb)
107
108
109
110
111 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 107.159 kb on + strand at 107.159 kb on + strand at 107.160 kb on - strand at 107.160 kb on - strand at 107.160 kb on - strand at 107.160 kb on - strand at 107.315 kb on + strand at 107.315 kb on + strand at 107.315 kb on + strand at 107.315 kb on + strand at 107.315 kb on + strand at 107.315 kb on + strand at 107.315 kb on + strand at 107.315 kb on + strand at 107.315 kb on + strand at 107.315 kb on + strand at 107.315 kb on + strand at 107.315 kb on + strand at 107.315 kb on + strand at 107.315 kb on + strand at 107.315 kb on + strand at 107.315 kb on + strand at 107.315 kb on + strand at 107.315 kb on + strand at 107.316 kb on - strand at 107.316 kb on - strand at 107.316 kb on - strand at 107.316 kb on - strand at 107.316 kb on - strand at 107.316 kb on - strand at 107.316 kb on - strand at 107.316 kb on - strand at 107.316 kb on - strand at 107.316 kb on - strand at 107.316 kb on - strand at 107.316 kb on - strand at 107.327 kb on + strand at 107.327 kb on + strand at 107.327 kb on + strand at 107.327 kb on + strand at 107.331 kb on + strand at 107.332 kb on - strand at 107.513 kb on + strand at 107.513 kb on + strand at 107.513 kb on + strand at 107.646 kb on + strand at 107.646 kb on + strand at 107.646 kb on + strand at 107.646 kb on + strand at 107.646 kb on + strand at 107.646 kb on + strand at 107.646 kb on + strand at 107.646 kb on + strand at 107.646 kb on + strand at 107.646 kb on + strand at 107.646 kb on + strand at 107.646 kb on + strand at 107.647 kb on - strand at 107.647 kb on - strand at 107.647 kb on - strand at 107.647 kb on - strand at 107.647 kb on - strand at 107.647 kb on - strand at 107.647 kb on - strand at 107.647 kb on - strand at 107.647 kb on - strand at 107.647 kb on - strand at 107.647 kb on - strand at 107.777 kb on + strand, within Ac3H11_1531 at 107.777 kb on + strand, within Ac3H11_1531 at 107.778 kb on - strand, within Ac3H11_1531 at 107.791 kb on + strand, within Ac3H11_1531 at 107.791 kb on + strand, within Ac3H11_1531 at 107.792 kb on - strand, within Ac3H11_1531 at 107.792 kb on - strand, within Ac3H11_1531 at 107.792 kb on - strand, within Ac3H11_1531 at 107.792 kb on - strand, within Ac3H11_1531 at 107.799 kb on + strand, within Ac3H11_1531 at 107.799 kb on + strand, within Ac3H11_1531 at 107.799 kb on + strand, within Ac3H11_1531 at 107.799 kb on + strand, within Ac3H11_1531 at 107.799 kb on + strand, within Ac3H11_1531 at 107.799 kb on + strand, within Ac3H11_1531 at 107.800 kb on - strand, within Ac3H11_1531 at 107.800 kb on - strand, within Ac3H11_1531 at 107.800 kb on - strand, within Ac3H11_1531 at 107.800 kb on - strand, within Ac3H11_1531 at 107.800 kb on - strand, within Ac3H11_1531 at 107.800 kb on - strand, within Ac3H11_1531 at 107.800 kb on - strand, within Ac3H11_1531 at 107.800 kb on - strand, within Ac3H11_1531 at 108.035 kb on + strand, within Ac3H11_1531 at 108.035 kb on + strand, within Ac3H11_1531 at 108.036 kb on - strand, within Ac3H11_1531 at 108.036 kb on - strand, within Ac3H11_1531 at 108.039 kb on + strand, within Ac3H11_1531 at 108.039 kb on + strand, within Ac3H11_1531 at 108.039 kb on + strand, within Ac3H11_1531 at 108.039 kb on + strand, within Ac3H11_1531 at 108.039 kb on + strand, within Ac3H11_1531 at 108.039 kb on + strand, within Ac3H11_1531 at 108.039 kb on + strand, within Ac3H11_1531 at 108.039 kb on + strand, within Ac3H11_1531 at 108.039 kb on + strand, within Ac3H11_1531 at 108.039 kb on + strand, within Ac3H11_1531 at 108.039 kb on + strand, within Ac3H11_1531 at 108.039 kb on + strand, within Ac3H11_1531 at 108.039 kb on + strand, within Ac3H11_1531 at 108.039 kb on + strand, within Ac3H11_1531 at 108.039 kb on + strand, within Ac3H11_1531 at 108.040 kb on - strand, within Ac3H11_1531 at 108.040 kb on - strand, within Ac3H11_1531 at 108.040 kb on - strand, within Ac3H11_1531 at 108.040 kb on - strand, within Ac3H11_1531 at 108.040 kb on - strand, within Ac3H11_1531 at 108.040 kb on - strand, within Ac3H11_1531 at 108.509 kb on + strand, within Ac3H11_1531 at 108.748 kb on + strand, within Ac3H11_1531 at 108.749 kb on - strand, within Ac3H11_1531 at 108.808 kb on + strand, within Ac3H11_1531 at 108.808 kb on + strand, within Ac3H11_1531 at 108.809 kb on - strand, within Ac3H11_1531 at 108.809 kb on - strand, within Ac3H11_1531 at 108.809 kb on - strand, within Ac3H11_1531 at 108.857 kb on - strand, within Ac3H11_1531 at 108.976 kb on + strand, within Ac3H11_1531 at 108.976 kb on + strand, within Ac3H11_1531 at 108.976 kb on + strand, within Ac3H11_1531 at 109.020 kb on + strand, within Ac3H11_1531 at 109.020 kb on + strand, within Ac3H11_1531 at 109.020 kb on + strand, within Ac3H11_1531 at 109.020 kb on + strand, within Ac3H11_1531 at 109.021 kb on - strand, within Ac3H11_1531 at 109.021 kb on - strand, within Ac3H11_1531 at 109.021 kb on - strand, within Ac3H11_1531 at 109.080 kb on + strand, within Ac3H11_1531 at 109.080 kb on + strand, within Ac3H11_1531 at 109.080 kb on + strand, within Ac3H11_1531 at 109.080 kb on + strand, within Ac3H11_1531 at 109.080 kb on + strand, within Ac3H11_1531 at 109.081 kb on - strand, within Ac3H11_1531 at 109.081 kb on - strand, within Ac3H11_1531 at 109.081 kb on - strand, within Ac3H11_1531 at 109.081 kb on - strand, within Ac3H11_1531 at 109.081 kb on - strand, within Ac3H11_1531 at 109.089 kb on + strand, within Ac3H11_1531 at 109.089 kb on + strand, within Ac3H11_1531 at 109.090 kb on - strand, within Ac3H11_1531 at 109.090 kb on - strand, within Ac3H11_1531 at 109.090 kb on - strand, within Ac3H11_1531 at 109.315 kb on - strand, within Ac3H11_1531 at 110.126 kb on + strand at 110.126 kb on + strand at 110.126 kb on + strand at 110.126 kb on + strand at 110.126 kb on + strand at 110.127 kb on - strand at 110.127 kb on - strand at 110.127 kb on - strand at 110.127 kb on - strand at 110.127 kb on - strand at 110.141 kb on + strand at 110.142 kb on - strand at 110.142 kb on - strand at 110.426 kb on + strand, within Ac3H11_1532 at 110.426 kb on + strand, within Ac3H11_1532 at 110.426 kb on + strand, within Ac3H11_1532 at 110.426 kb on + strand, within Ac3H11_1532 at 110.426 kb on + strand, within Ac3H11_1532 at 110.426 kb on + strand, within Ac3H11_1532 at 110.427 kb on - strand, within Ac3H11_1532 at 110.432 kb on + strand, within Ac3H11_1532 at 110.432 kb on + strand, within Ac3H11_1532 at 110.432 kb on + strand, within Ac3H11_1532 at 110.432 kb on + strand, within Ac3H11_1532 at 110.432 kb on + strand, within Ac3H11_1532 at 110.432 kb on + strand, within Ac3H11_1532 at 110.432 kb on + strand, within Ac3H11_1532 at 110.432 kb on + strand, within Ac3H11_1532 at 110.432 kb on + strand, within Ac3H11_1532 at 110.432 kb on + strand, within Ac3H11_1532 at 110.433 kb on - strand, within Ac3H11_1532 at 110.433 kb on - strand, within Ac3H11_1532 at 110.433 kb on - strand, within Ac3H11_1532 at 110.433 kb on - strand, within Ac3H11_1532 at 110.433 kb on - strand, within Ac3H11_1532 at 110.433 kb on - strand, within Ac3H11_1532 at 110.433 kb on - strand, within Ac3H11_1532 at 110.433 kb on - strand, within Ac3H11_1532 at 110.433 kb on - strand, within Ac3H11_1532 at 110.433 kb on - strand, within Ac3H11_1532 at 110.433 kb on - strand, within Ac3H11_1532 at 110.433 kb on - strand, within Ac3H11_1532 at 110.433 kb on - strand, within Ac3H11_1532 at 110.433 kb on - strand, within Ac3H11_1532 at 110.433 kb on - strand, within Ac3H11_1532 at 110.481 kb on + strand, within Ac3H11_1532 at 110.481 kb on + strand, within Ac3H11_1532 at 110.481 kb on + strand, within Ac3H11_1532 at 110.481 kb on + strand, within Ac3H11_1532 at 110.481 kb on + strand, within Ac3H11_1532 at 110.481 kb on + strand, within Ac3H11_1532 at 110.482 kb on - strand, within Ac3H11_1532 at 110.482 kb on - strand, within Ac3H11_1532 at 110.482 kb on - strand, within Ac3H11_1532 at 110.482 kb on - strand, within Ac3H11_1532 at 110.675 kb on + strand, within Ac3H11_1532 at 110.675 kb on + strand, within Ac3H11_1532 at 110.675 kb on + strand, within Ac3H11_1532 at 110.675 kb on + strand, within Ac3H11_1532 at 110.675 kb on + strand, within Ac3H11_1532 at 110.675 kb on + strand, within Ac3H11_1532 at 110.676 kb on - strand, within Ac3H11_1532 at 110.676 kb on - strand, within Ac3H11_1532 at 110.846 kb on + strand at 110.847 kb on - strand at 110.864 kb on + strand at 110.864 kb on + strand at 110.865 kb on - strand at 110.865 kb on - strand at 110.865 kb on - strand at 110.903 kb on + strand at 110.903 kb on + strand at 110.903 kb on + strand at 110.903 kb on + strand at 110.904 kb on - strand at 110.904 kb on - strand at 110.904 kb on - strand at 110.904 kb on - strand at 110.904 kb on - strand at 111.043 kb on + strand, within Ac3H11_1533 at 111.043 kb on + strand, within Ac3H11_1533 at 111.044 kb on - strand, within Ac3H11_1533 at 111.044 kb on - strand, within Ac3H11_1533 at 111.044 kb on - strand, within Ac3H11_1533 at 111.044 kb on - strand, within Ac3H11_1533 at 111.044 kb on - strand, within Ac3H11_1533 at 111.044 kb on - strand, within Ac3H11_1533 at 111.044 kb on - strand, within Ac3H11_1533 at 111.044 kb on - strand, within Ac3H11_1533 at 111.044 kb on - strand, within Ac3H11_1533 at 111.044 kb on - strand, within Ac3H11_1533 at 111.044 kb on - strand, within Ac3H11_1533 at 111.044 kb on - strand, within Ac3H11_1533
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.4 mM remove 107,159 + +1.9 107,159 + -1.1 107,160 - +1.3 107,160 - +0.2 107,160 - -0.2 107,160 - +0.6 107,315 + -1.5 107,315 + +0.5 107,315 + -1.5 107,315 + +0.3 107,315 + -0.0 107,315 + -0.4 107,315 + +0.2 107,315 + -0.5 107,315 + +0.9 107,315 + +0.3 107,315 + -2.3 107,315 + -0.2 107,315 + +1.0 107,315 + +0.1 107,315 + -2.2 107,315 + -0.1 107,315 + +0.5 107,315 + +0.9 107,316 - -0.2 107,316 - +1.2 107,316 - +1.8 107,316 - +1.2 107,316 - +3.8 107,316 - +0.2 107,316 - -0.2 107,316 - +0.7 107,316 - -0.4 107,316 - -0.4 107,316 - -0.9 107,316 - +0.7 107,327 + +0.4 107,327 + +0.1 107,327 + -1.7 107,327 + +1.8 107,331 + -0.6 107,332 - +1.1 107,513 + -0.1 107,513 + -1.9 107,513 + -0.4 107,646 + -3.5 107,646 + -2.9 107,646 + -0.0 107,646 + -0.3 107,646 + +0.5 107,646 + +1.0 107,646 + -1.9 107,646 + -3.4 107,646 + -0.1 107,646 + -0.6 107,646 + +0.7 107,646 + -0.4 107,647 - +0.4 107,647 - +1.7 107,647 - -0.6 107,647 - +2.7 107,647 - +2.1 107,647 - +0.0 107,647 - +1.1 107,647 - +1.4 107,647 - +0.1 107,647 - -1.4 107,647 - +2.2 107,777 + Ac3H11_1531 0.12 +0.2 107,777 + Ac3H11_1531 0.12 -0.3 107,778 - Ac3H11_1531 0.12 -0.4 107,791 + Ac3H11_1531 0.13 -0.4 107,791 + Ac3H11_1531 0.13 -1.3 107,792 - Ac3H11_1531 0.13 +1.0 107,792 - Ac3H11_1531 0.13 +0.2 107,792 - Ac3H11_1531 0.13 -0.5 107,792 - Ac3H11_1531 0.13 -1.0 107,799 + Ac3H11_1531 0.13 +2.7 107,799 + Ac3H11_1531 0.13 -0.2 107,799 + Ac3H11_1531 0.13 -0.4 107,799 + Ac3H11_1531 0.13 +0.9 107,799 + Ac3H11_1531 0.13 -0.7 107,799 + Ac3H11_1531 0.13 -0.4 107,800 - Ac3H11_1531 0.13 -0.5 107,800 - Ac3H11_1531 0.13 -0.9 107,800 - Ac3H11_1531 0.13 -0.4 107,800 - Ac3H11_1531 0.13 +0.4 107,800 - Ac3H11_1531 0.13 +3.2 107,800 - Ac3H11_1531 0.13 +1.8 107,800 - Ac3H11_1531 0.13 +0.5 107,800 - Ac3H11_1531 0.13 +3.3 108,035 + Ac3H11_1531 0.22 +0.1 108,035 + Ac3H11_1531 0.22 -1.2 108,036 - Ac3H11_1531 0.22 +1.2 108,036 - Ac3H11_1531 0.22 +1.8 108,039 + Ac3H11_1531 0.22 +0.7 108,039 + Ac3H11_1531 0.22 -0.2 108,039 + Ac3H11_1531 0.22 -0.6 108,039 + Ac3H11_1531 0.22 +0.7 108,039 + Ac3H11_1531 0.22 +0.4 108,039 + Ac3H11_1531 0.22 +1.6 108,039 + Ac3H11_1531 0.22 +1.6 108,039 + Ac3H11_1531 0.22 -0.9 108,039 + Ac3H11_1531 0.22 -0.5 108,039 + Ac3H11_1531 0.22 -0.5 108,039 + Ac3H11_1531 0.22 +1.4 108,039 + Ac3H11_1531 0.22 -0.2 108,039 + Ac3H11_1531 0.22 +2.1 108,039 + Ac3H11_1531 0.22 +0.3 108,039 + Ac3H11_1531 0.22 -1.6 108,040 - Ac3H11_1531 0.22 +4.1 108,040 - Ac3H11_1531 0.22 -0.7 108,040 - Ac3H11_1531 0.22 -0.7 108,040 - Ac3H11_1531 0.22 -0.5 108,040 - Ac3H11_1531 0.22 -0.4 108,040 - Ac3H11_1531 0.22 +0.6 108,509 + Ac3H11_1531 0.41 -0.1 108,748 + Ac3H11_1531 0.50 -0.4 108,749 - Ac3H11_1531 0.50 +0.5 108,808 + Ac3H11_1531 0.52 -0.6 108,808 + Ac3H11_1531 0.52 +2.5 108,809 - Ac3H11_1531 0.52 +1.6 108,809 - Ac3H11_1531 0.52 -1.3 108,809 - Ac3H11_1531 0.52 +0.1 108,857 - Ac3H11_1531 0.54 -2.3 108,976 + Ac3H11_1531 0.59 -0.5 108,976 + Ac3H11_1531 0.59 +0.4 108,976 + Ac3H11_1531 0.59 +1.9 109,020 + Ac3H11_1531 0.60 +1.3 109,020 + Ac3H11_1531 0.60 -0.8 109,020 + Ac3H11_1531 0.60 -0.5 109,020 + Ac3H11_1531 0.60 +0.7 109,021 - Ac3H11_1531 0.60 +0.1 109,021 - Ac3H11_1531 0.60 -0.4 109,021 - Ac3H11_1531 0.60 +0.1 109,080 + Ac3H11_1531 0.63 -1.9 109,080 + Ac3H11_1531 0.63 +0.6 109,080 + Ac3H11_1531 0.63 +1.0 109,080 + Ac3H11_1531 0.63 +0.5 109,080 + Ac3H11_1531 0.63 -1.2 109,081 - Ac3H11_1531 0.63 +0.2 109,081 - Ac3H11_1531 0.63 +2.1 109,081 - Ac3H11_1531 0.63 +1.1 109,081 - Ac3H11_1531 0.63 -0.5 109,081 - Ac3H11_1531 0.63 +0.7 109,089 + Ac3H11_1531 0.63 +1.4 109,089 + Ac3H11_1531 0.63 -0.7 109,090 - Ac3H11_1531 0.63 -0.9 109,090 - Ac3H11_1531 0.63 +1.5 109,090 - Ac3H11_1531 0.63 -0.4 109,315 - Ac3H11_1531 0.72 +0.4 110,126 + +0.9 110,126 + +0.9 110,126 + +0.5 110,126 + +0.8 110,126 + +0.9 110,127 - +0.2 110,127 - +0.3 110,127 - +0.4 110,127 - +1.8 110,127 - +1.1 110,141 + +0.3 110,142 - +1.6 110,142 - +0.9 110,426 + Ac3H11_1532 0.40 +0.5 110,426 + Ac3H11_1532 0.40 +0.3 110,426 + Ac3H11_1532 0.40 +1.5 110,426 + Ac3H11_1532 0.40 +1.2 110,426 + Ac3H11_1532 0.40 +0.4 110,426 + Ac3H11_1532 0.40 +0.7 110,427 - Ac3H11_1532 0.40 +1.9 110,432 + Ac3H11_1532 0.41 +0.4 110,432 + Ac3H11_1532 0.41 +0.9 110,432 + Ac3H11_1532 0.41 +0.4 110,432 + Ac3H11_1532 0.41 +0.2 110,432 + Ac3H11_1532 0.41 -0.0 110,432 + Ac3H11_1532 0.41 +0.7 110,432 + Ac3H11_1532 0.41 +1.1 110,432 + Ac3H11_1532 0.41 +0.7 110,432 + Ac3H11_1532 0.41 +0.3 110,432 + Ac3H11_1532 0.41 +0.1 110,433 - Ac3H11_1532 0.41 +2.4 110,433 - Ac3H11_1532 0.41 -0.7 110,433 - Ac3H11_1532 0.41 +2.7 110,433 - Ac3H11_1532 0.41 +2.0 110,433 - Ac3H11_1532 0.41 -0.2 110,433 - Ac3H11_1532 0.41 +0.3 110,433 - Ac3H11_1532 0.41 +0.0 110,433 - Ac3H11_1532 0.41 -0.5 110,433 - Ac3H11_1532 0.41 +1.0 110,433 - Ac3H11_1532 0.41 +3.3 110,433 - Ac3H11_1532 0.41 -0.0 110,433 - Ac3H11_1532 0.41 +0.1 110,433 - Ac3H11_1532 0.41 +0.5 110,433 - Ac3H11_1532 0.41 +1.3 110,433 - Ac3H11_1532 0.41 -1.5 110,481 + Ac3H11_1532 0.46 +1.1 110,481 + Ac3H11_1532 0.46 +2.1 110,481 + Ac3H11_1532 0.46 -1.0 110,481 + Ac3H11_1532 0.46 +0.7 110,481 + Ac3H11_1532 0.46 +0.3 110,481 + Ac3H11_1532 0.46 +0.7 110,482 - Ac3H11_1532 0.47 -0.0 110,482 - Ac3H11_1532 0.47 +1.4 110,482 - Ac3H11_1532 0.47 +0.9 110,482 - Ac3H11_1532 0.47 +1.9 110,675 + Ac3H11_1532 0.70 -0.2 110,675 + Ac3H11_1532 0.70 +0.6 110,675 + Ac3H11_1532 0.70 +0.0 110,675 + Ac3H11_1532 0.70 +1.3 110,675 + Ac3H11_1532 0.70 +0.8 110,675 + Ac3H11_1532 0.70 +1.0 110,676 - Ac3H11_1532 0.70 +1.1 110,676 - Ac3H11_1532 0.70 +1.6 110,846 + -0.2 110,847 - +1.1 110,864 + +0.1 110,864 + +2.4 110,865 - -0.4 110,865 - +0.5 110,865 - +1.5 110,903 + +0.5 110,903 + +0.0 110,903 + +0.6 110,903 + -0.1 110,904 - -0.9 110,904 - -0.3 110,904 - +1.5 110,904 - -0.5 110,904 - -0.6 111,043 + Ac3H11_1533 0.17 -0.0 111,043 + Ac3H11_1533 0.17 +0.1 111,044 - Ac3H11_1533 0.17 +0.7 111,044 - Ac3H11_1533 0.17 -0.1 111,044 - Ac3H11_1533 0.17 +1.1 111,044 - Ac3H11_1533 0.17 +0.1 111,044 - Ac3H11_1533 0.17 +1.1 111,044 - Ac3H11_1533 0.17 -0.6 111,044 - Ac3H11_1533 0.17 +0.9 111,044 - Ac3H11_1533 0.17 +2.4 111,044 - Ac3H11_1533 0.17 +1.5 111,044 - Ac3H11_1533 0.17 -0.2 111,044 - Ac3H11_1533 0.17 -0.1 111,044 - Ac3H11_1533 0.17 -0.8
Or see this region's nucleotide sequence