Experiment: Cobalt chloride 0.4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1230 and Ac3H11_1231 are separated by 68 nucleotides Ac3H11_1231 and Ac3H11_1232 are separated by 80 nucleotides Ac3H11_1232 and Ac3H11_1233 are separated by 181 nucleotides Ac3H11_1233 and Ac3H11_1234 are separated by 127 nucleotides
Ac3H11_1230 - Transcriptional regulator, TetR family, at 48,069 to 48,785
_1230
Ac3H11_1231 - Glutathione S-transferase family protein, at 48,854 to 49,468
_1231
Ac3H11_1232 - Adenylosuccinate lyase (EC 4.3.2.2), at 49,549 to 50,967
_1232
Ac3H11_1233 - YaeQ protein, at 51,149 to 51,709
_1233
Ac3H11_1234 - FIG00932085: hypothetical protein, at 51,837 to 52,142
_1234
Position (kb)
49
50
51 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 48.550 kb on + strand, within Ac3H11_1230 at 48.550 kb on + strand, within Ac3H11_1230 at 48.550 kb on + strand, within Ac3H11_1230 at 48.550 kb on + strand, within Ac3H11_1230 at 48.551 kb on - strand, within Ac3H11_1230 at 48.551 kb on - strand, within Ac3H11_1230 at 48.551 kb on - strand, within Ac3H11_1230 at 48.551 kb on - strand, within Ac3H11_1230 at 48.551 kb on - strand, within Ac3H11_1230 at 48.551 kb on - strand, within Ac3H11_1230 at 48.551 kb on - strand, within Ac3H11_1230 at 48.551 kb on - strand, within Ac3H11_1230 at 48.799 kb on + strand at 48.800 kb on - strand at 48.800 kb on - strand at 48.868 kb on + strand at 48.869 kb on - strand at 49.023 kb on + strand, within Ac3H11_1231 at 49.023 kb on + strand, within Ac3H11_1231 at 49.023 kb on + strand, within Ac3H11_1231 at 49.024 kb on - strand, within Ac3H11_1231 at 49.024 kb on - strand, within Ac3H11_1231 at 49.024 kb on - strand, within Ac3H11_1231 at 49.264 kb on - strand, within Ac3H11_1231 at 49.392 kb on + strand, within Ac3H11_1231 at 49.420 kb on + strand at 49.420 kb on + strand at 49.420 kb on + strand at 49.420 kb on + strand at 49.420 kb on + strand at 49.420 kb on + strand at 49.420 kb on + strand at 49.420 kb on + strand at 49.420 kb on + strand at 49.421 kb on - strand at 49.421 kb on - strand at 49.421 kb on - strand at 49.421 kb on - strand at 49.421 kb on - strand at 49.421 kb on - strand at 49.424 kb on + strand at 49.424 kb on + strand at 49.424 kb on + strand at 49.424 kb on + strand at 49.424 kb on + strand at 49.424 kb on + strand at 49.424 kb on + strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.425 kb on - strand at 49.437 kb on + strand at 49.437 kb on + strand at 49.437 kb on + strand at 49.438 kb on - strand at 49.438 kb on - strand at 49.438 kb on - strand at 49.438 kb on - strand at 49.492 kb on + strand at 49.493 kb on - strand at 49.518 kb on + strand at 49.561 kb on + strand at 49.561 kb on + strand at 49.561 kb on + strand at 49.562 kb on - strand at 49.574 kb on + strand at 49.574 kb on + strand at 51.065 kb on + strand at 51.066 kb on - strand at 51.066 kb on - strand at 51.066 kb on - strand at 51.087 kb on - strand at 51.087 kb on - strand at 51.087 kb on - strand at 51.126 kb on + strand at 51.130 kb on + strand at 51.131 kb on - strand at 51.137 kb on + strand at 51.138 kb on - strand at 51.209 kb on + strand, within Ac3H11_1233 at 51.209 kb on + strand, within Ac3H11_1233 at 51.210 kb on - strand, within Ac3H11_1233 at 51.212 kb on + strand, within Ac3H11_1233 at 51.212 kb on + strand, within Ac3H11_1233 at 51.212 kb on + strand, within Ac3H11_1233 at 51.213 kb on - strand, within Ac3H11_1233 at 51.213 kb on - strand, within Ac3H11_1233 at 51.274 kb on + strand, within Ac3H11_1233 at 51.274 kb on + strand, within Ac3H11_1233 at 51.274 kb on + strand, within Ac3H11_1233 at 51.274 kb on + strand, within Ac3H11_1233 at 51.275 kb on - strand, within Ac3H11_1233 at 51.275 kb on - strand, within Ac3H11_1233 at 51.488 kb on + strand, within Ac3H11_1233 at 51.707 kb on + strand at 51.707 kb on + strand at 51.708 kb on - strand at 51.779 kb on + strand at 51.833 kb on - strand at 51.833 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.4 mM remove 48,550 + Ac3H11_1230 0.67 +1.0 48,550 + Ac3H11_1230 0.67 +0.9 48,550 + Ac3H11_1230 0.67 +0.5 48,550 + Ac3H11_1230 0.67 +1.0 48,551 - Ac3H11_1230 0.67 +0.5 48,551 - Ac3H11_1230 0.67 +1.3 48,551 - Ac3H11_1230 0.67 +0.5 48,551 - Ac3H11_1230 0.67 -0.9 48,551 - Ac3H11_1230 0.67 +0.3 48,551 - Ac3H11_1230 0.67 +0.5 48,551 - Ac3H11_1230 0.67 -0.8 48,551 - Ac3H11_1230 0.67 +0.1 48,799 + -0.3 48,800 - -0.8 48,800 - +2.1 48,868 + -0.9 48,869 - +0.6 49,023 + Ac3H11_1231 0.27 +2.0 49,023 + Ac3H11_1231 0.27 +0.6 49,023 + Ac3H11_1231 0.27 -0.4 49,024 - Ac3H11_1231 0.28 +0.5 49,024 - Ac3H11_1231 0.28 +1.2 49,024 - Ac3H11_1231 0.28 +1.3 49,264 - Ac3H11_1231 0.67 +0.1 49,392 + Ac3H11_1231 0.87 -0.6 49,420 + +0.4 49,420 + -0.2 49,420 + +0.8 49,420 + +1.3 49,420 + +1.2 49,420 + +0.9 49,420 + +0.9 49,420 + -0.2 49,420 + +0.1 49,421 - -0.6 49,421 - +2.5 49,421 - -0.9 49,421 - +0.4 49,421 - -0.1 49,421 - +0.8 49,424 + +0.7 49,424 + +0.7 49,424 + +1.1 49,424 + +0.5 49,424 + +1.0 49,424 + +0.1 49,424 + -0.1 49,425 - -0.5 49,425 - +2.9 49,425 - +2.9 49,425 - +0.9 49,425 - -2.8 49,425 - +0.8 49,425 - +0.3 49,425 - +0.4 49,425 - -0.5 49,425 - -0.8 49,437 + -0.6 49,437 + +0.7 49,437 + -0.2 49,438 - +0.5 49,438 - -0.1 49,438 - +1.5 49,438 - +1.1 49,492 + +0.6 49,493 - -0.0 49,518 + +0.3 49,561 + -1.1 49,561 + +0.9 49,561 + +0.2 49,562 - -0.6 49,574 + -0.0 49,574 + -0.1 51,065 + -0.5 51,066 - -0.7 51,066 - -0.0 51,066 - +1.5 51,087 - -2.2 51,087 - -0.4 51,087 - -0.5 51,126 + -1.5 51,130 + -2.8 51,131 - +0.3 51,137 + +0.9 51,138 - -0.3 51,209 + Ac3H11_1233 0.11 +1.7 51,209 + Ac3H11_1233 0.11 -0.9 51,210 - Ac3H11_1233 0.11 -1.9 51,212 + Ac3H11_1233 0.11 +1.7 51,212 + Ac3H11_1233 0.11 +0.4 51,212 + Ac3H11_1233 0.11 +0.2 51,213 - Ac3H11_1233 0.11 -0.7 51,213 - Ac3H11_1233 0.11 +1.0 51,274 + Ac3H11_1233 0.22 -0.5 51,274 + Ac3H11_1233 0.22 -0.6 51,274 + Ac3H11_1233 0.22 -0.8 51,274 + Ac3H11_1233 0.22 +0.8 51,275 - Ac3H11_1233 0.22 -1.7 51,275 - Ac3H11_1233 0.22 +1.0 51,488 + Ac3H11_1233 0.60 -2.5 51,707 + +0.3 51,707 + -0.1 51,708 - +0.1 51,779 + -0.2 51,833 - +0.3 51,833 - +0.3
Or see this region's nucleotide sequence