Experiment: MoYLS4 with Lomefloxacin 0.00078 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2195 and DvMF_2196 are separated by 184 nucleotides DvMF_2196 and DvMF_2197 are separated by 453 nucleotides
DvMF_2195: DvMF_2195 - hypothetical protein (RefSeq), at 2,741,701 to 2,742,951
_2195
DvMF_2196: DvMF_2196 - FAD linked oxidase domain protein (RefSeq), at 2,743,136 to 2,745,964
_2196
DvMF_2197: DvMF_2197 - protein of unknown function DUF805 (RefSeq), at 2,746,418 to 2,747,458
_2197
Position (kb)
2743
2744
2745
2746 Strain fitness (log2 ratio)
-2
-1
0
1 at 2742.397 kb on + strand, within DvMF_2195 at 2742.769 kb on + strand, within DvMF_2195 at 2742.769 kb on - strand, within DvMF_2195 at 2742.815 kb on + strand, within DvMF_2195 at 2742.823 kb on - strand, within DvMF_2195 at 2742.975 kb on + strand at 2743.030 kb on - strand at 2743.308 kb on - strand at 2743.687 kb on - strand, within DvMF_2196 at 2743.728 kb on - strand, within DvMF_2196 at 2743.901 kb on - strand, within DvMF_2196 at 2744.006 kb on - strand, within DvMF_2196 at 2744.185 kb on + strand, within DvMF_2196 at 2744.551 kb on + strand, within DvMF_2196 at 2744.694 kb on + strand, within DvMF_2196 at 2744.921 kb on - strand, within DvMF_2196 at 2745.039 kb on - strand, within DvMF_2196 at 2745.042 kb on - strand, within DvMF_2196 at 2745.431 kb on + strand, within DvMF_2196 at 2745.431 kb on + strand, within DvMF_2196 at 2745.439 kb on - strand, within DvMF_2196 at 2745.439 kb on - strand, within DvMF_2196 at 2745.478 kb on + strand, within DvMF_2196 at 2745.486 kb on - strand, within DvMF_2196 at 2745.571 kb on - strand, within DvMF_2196 at 2746.105 kb on + strand at 2746.110 kb on + strand at 2746.113 kb on - strand at 2746.118 kb on - strand at 2746.271 kb on - strand at 2746.416 kb on + strand at 2746.434 kb on + strand at 2746.519 kb on + strand at 2746.885 kb on + strand, within DvMF_2197
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Lomefloxacin 0.00078 mM remove 2,742,397 + DvMF_2195 0.56 -0.7 2,742,769 + DvMF_2195 0.85 -0.6 2,742,769 - DvMF_2195 0.85 -0.2 2,742,815 + DvMF_2195 0.89 +0.4 2,742,823 - DvMF_2195 0.90 -1.0 2,742,975 + -0.3 2,743,030 - -0.0 2,743,308 - +0.0 2,743,687 - DvMF_2196 0.19 -0.4 2,743,728 - DvMF_2196 0.21 -0.9 2,743,901 - DvMF_2196 0.27 -0.7 2,744,006 - DvMF_2196 0.31 -0.8 2,744,185 + DvMF_2196 0.37 -1.3 2,744,551 + DvMF_2196 0.50 -0.3 2,744,694 + DvMF_2196 0.55 -0.5 2,744,921 - DvMF_2196 0.63 -0.3 2,745,039 - DvMF_2196 0.67 -0.4 2,745,042 - DvMF_2196 0.67 -2.1 2,745,431 + DvMF_2196 0.81 -0.2 2,745,431 + DvMF_2196 0.81 -0.7 2,745,439 - DvMF_2196 0.81 -0.5 2,745,439 - DvMF_2196 0.81 -0.7 2,745,478 + DvMF_2196 0.83 -0.4 2,745,486 - DvMF_2196 0.83 -0.3 2,745,571 - DvMF_2196 0.86 -0.5 2,746,105 + -0.4 2,746,110 + -0.3 2,746,113 - -0.4 2,746,118 - -0.4 2,746,271 - -0.4 2,746,416 + -0.3 2,746,434 + -0.3 2,746,519 + -0.0 2,746,885 + DvMF_2197 0.45 -0.6
Or see this region's nucleotide sequence