Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_990

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,156,850	+				+0.5
1,156,850	+				+1.0
1,156,850	+				+0.4
1,156,850	+				+1.3
1,156,850	+				+0.1
1,156,850	+				-0.5
1,156,851	-				+0.0
1,156,851	-				+0.0
1,156,851	-				-1.4
1,156,851	-				-0.3
1,156,851	-				+0.5
1,156,851	-				-0.4
1,156,851	-				+0.7
1,156,851	-				+0.5
1,156,851	-				+0.1
1,156,896	+				+0.5
1,156,896	+				+0.2
1,156,923	+		Pf6N2E2_989	0.10	-0.6
1,156,924	-		Pf6N2E2_989	0.10	+0.4
1,156,926	+		Pf6N2E2_989	0.11	+0.2
1,156,927	-		Pf6N2E2_989	0.11	+0.4
1,156,927	-				-1.2
1,156,927	-		Pf6N2E2_989	0.11	-0.9
1,157,018	+		Pf6N2E2_989	0.21	-2.3
1,157,018	+		Pf6N2E2_989	0.21	-0.3
1,157,018	+		Pf6N2E2_989	0.21	+0.7
1,157,018	+		Pf6N2E2_989	0.21	-0.1
1,157,018	+		Pf6N2E2_989	0.21	+0.6
1,157,019	-		Pf6N2E2_989	0.21	+0.0
1,157,019	-		Pf6N2E2_989	0.21	+1.5
1,157,057	+		Pf6N2E2_989	0.25	-1.6
1,157,057	+		Pf6N2E2_989	0.25	+0.2
1,157,292	+		Pf6N2E2_989	0.51	+0.4
1,157,293	-		Pf6N2E2_989	0.51	+0.1
1,157,303	+		Pf6N2E2_989	0.52	+0.1
1,157,303	+		Pf6N2E2_989	0.52	-1.3
1,157,303	+		Pf6N2E2_989	0.52	+0.4
1,157,303	+		Pf6N2E2_989	0.52	-0.1
1,157,303	+		Pf6N2E2_989	0.52	+0.1
1,157,303	+		Pf6N2E2_989	0.52	+0.4
1,157,304	-		Pf6N2E2_989	0.52	+0.0
1,157,304	-		Pf6N2E2_989	0.52	-0.5
1,157,334	+		Pf6N2E2_989	0.55	-0.4
1,157,334	+		Pf6N2E2_989	0.55	-0.9
1,157,335	-		Pf6N2E2_989	0.55	-1.4
1,157,335	-		Pf6N2E2_989	0.55	+0.4
1,157,336	+		Pf6N2E2_989	0.56	-0.3
1,157,336	+		Pf6N2E2_989	0.56	+1.5
1,157,336	+		Pf6N2E2_989	0.56	+0.1
1,157,336	+		Pf6N2E2_989	0.56	+0.0
1,157,336	+		Pf6N2E2_989	0.56	+0.2
1,157,336	+		Pf6N2E2_989	0.56	-0.3
1,157,336	+		Pf6N2E2_989	0.56	-0.6
1,157,336	+		Pf6N2E2_989	0.56	-0.1
1,157,336	+		Pf6N2E2_989	0.56	+0.5
1,157,336	+		Pf6N2E2_989	0.56	-0.9
1,157,336	+		Pf6N2E2_989	0.56	+0.3
1,157,336	+		Pf6N2E2_989	0.56	+0.4
1,157,336	+		Pf6N2E2_989	0.56	+0.2
1,157,336	+		Pf6N2E2_989	0.56	+0.0
1,157,337	-		Pf6N2E2_989	0.56	+1.0
1,157,337	-		Pf6N2E2_989	0.56	+1.6
1,157,337	-		Pf6N2E2_989	0.56	+0.2
1,157,337	-		Pf6N2E2_989	0.56	-0.1
1,157,337	-		Pf6N2E2_989	0.56	-1.6
1,157,337	-		Pf6N2E2_989	0.56	+1.8
1,157,337	-		Pf6N2E2_989	0.56	-0.5
1,157,353	+		Pf6N2E2_989	0.57	+1.1
1,157,354	-		Pf6N2E2_989	0.57	-0.6
1,157,573	+		Pf6N2E2_989	0.81	+0.6
1,157,574	-		Pf6N2E2_989	0.82	+0.2
1,157,574	-		Pf6N2E2_989	0.82	-0.9
1,157,623	+		Pf6N2E2_989	0.87	+0.4
1,157,654	+				+0.8
1,157,711	+				+0.6
1,157,712	-				+0.1
1,157,740	+				+0.7
1,157,741	-				+0.4
1,157,741	-				+0.7
1,157,744	+				+1.2
1,157,744	+				-0.0
1,157,744	+				-0.4
1,157,744	+				+1.5
1,157,744	+				+0.7
1,157,745	-				+0.1
1,157,745	-				-0.4
1,157,745	-				-0.1
1,157,808	-				-0.3
1,158,144	-		Pf6N2E2_990	0.43	+0.1
1,158,179	-		Pf6N2E2_990	0.47	+0.5
1,158,280	-		Pf6N2E2_990	0.60	-0.1
1,158,280	-		Pf6N2E2_990	0.60	-2.5
1,158,280	-		Pf6N2E2_990	0.60	-0.1
1,158,280	-		Pf6N2E2_990	0.60	-1.5
1,158,280	-		Pf6N2E2_990	0.60	-0.4
1,158,310	+		Pf6N2E2_990	0.63	-0.8
1,158,311	-		Pf6N2E2_990	0.64	-0.5
1,158,495	-		Pf6N2E2_990	0.87	-1.2
1,158,495	-		Pf6N2E2_990	0.87	-0.3
1,158,592	+				+0.0
1,158,592	+				-1.2
1,158,593	-				-1.1
1,158,593	-				-0.6
1,158,613	+				+0.8
1,158,614	-				-0.5
1,158,614	-				-0.1
1,158,614	-				+0.4
1,158,614	-				+0.3
1,158,638	-				+0.6
1,158,638	-				-0.6
1,158,692	+				+0.0
1,158,749	+		Pf6N2E2_991	0.13	+0.3
1,158,749	+		Pf6N2E2_991	0.13	+0.7
1,159,114	+		Pf6N2E2_991	0.50	-0.4
1,159,114	+		Pf6N2E2_991	0.50	+0.6
1,159,115	-		Pf6N2E2_991	0.51	-0.5
1,159,208	+		Pf6N2E2_991	0.60	+0.1
1,159,209	-		Pf6N2E2_991	0.60	+0.7
1,159,209	-		Pf6N2E2_991	0.60	+0.8
1,159,209	-		Pf6N2E2_991	0.60	+0.8
1,159,229	+		Pf6N2E2_991	0.62	-0.1
1,159,230	-		Pf6N2E2_991	0.63	-0.1
1,159,230	-		Pf6N2E2_991	0.63	+1.4
1,159,236	+		Pf6N2E2_991	0.63	+0.3
1,159,237	-		Pf6N2E2_991	0.63	+1.7
1,159,330	+		Pf6N2E2_991	0.73	-1.0
1,159,330	+		Pf6N2E2_991	0.73	+0.1
1,159,331	-		Pf6N2E2_991	0.73	+0.8
1,159,473	-		Pf6N2E2_991	0.88	+0.8
1,159,590	+				-0.9
1,159,591	-				-0.3
1,159,591	-				-0.1
1,159,591	-				-0.7
1,159,591	-				+0.4