Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3527

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,111,761	+				+0.4
4,111,761	+				-2.4
4,111,762	-				+0.4
4,111,762	-				-0.3
4,111,771	+				+0.3
4,111,833	-		Pf6N2E2_3526	0.17	+0.1
4,111,899	-		Pf6N2E2_3526	0.25	+0.6
4,112,183	-		Pf6N2E2_3526	0.58	+1.8
4,112,240	-		Pf6N2E2_3526	0.65	+0.8
4,112,253	-		Pf6N2E2_3526	0.67	+0.5
4,112,325	-		Pf6N2E2_3526	0.75	+0.8
4,112,325	-		Pf6N2E2_3526	0.75	-0.7
4,112,430	+		Pf6N2E2_3526	0.88	+0.4
4,112,430	+		Pf6N2E2_3526	0.88	+0.3
4,112,430	+		Pf6N2E2_3526	0.88	+0.2
4,112,431	-		Pf6N2E2_3526	0.88	+1.2
4,112,431	-		Pf6N2E2_3526	0.88	+0.0
4,112,460	-				+0.8
4,112,471	+				-0.1
4,112,471	+				+0.2
4,112,471	+				+0.0
4,112,472	-				-0.0
4,112,548	-				+0.4
4,112,549	+				+0.0
4,112,551	+				+0.6
4,112,552	-				-0.4
4,112,552	-				-0.2
4,112,678	+				+0.9
4,112,801	-				+0.9
4,112,891	-		Pf6N2E2_3527	0.22	+0.6
4,112,891	-		Pf6N2E2_3527	0.22	-0.7
4,112,891	-		Pf6N2E2_3527	0.22	-0.4
4,112,891	-		Pf6N2E2_3527	0.22	-1.4
4,112,891	-		Pf6N2E2_3527	0.22	-0.7
4,112,894	+		Pf6N2E2_3527	0.22	+0.5
4,112,895	-		Pf6N2E2_3527	0.22	+0.5
4,112,920	+		Pf6N2E2_3527	0.26	-0.5
4,112,920	+		Pf6N2E2_3527	0.26	-0.7
4,112,921	-		Pf6N2E2_3527	0.26	-0.8
4,112,921	-		Pf6N2E2_3527	0.26	-0.6
4,112,921	-		Pf6N2E2_3527	0.26	+0.3
4,112,956	+		Pf6N2E2_3527	0.32	+0.1
4,112,957	-		Pf6N2E2_3527	0.32	-0.8
4,113,225	-		Pf6N2E2_3527	0.73	-1.1
4,113,337	-				+1.3
4,113,376	-				+0.3
4,113,408	+				+0.3
4,113,408	+				-0.0
4,113,409	-				-0.1
4,113,409	-				+0.3
4,113,497	+				+0.0
4,113,501	+				+1.1
4,113,502	-				+0.1
4,113,502	-				-0.7
4,113,559	+				+0.6
4,113,559	+				-1.3
4,113,560	-				+0.4
4,113,646	+		Pf6N2E2_3528	0.21	+0.8
4,113,646	+		Pf6N2E2_3528	0.21	-0.1
4,113,646	+		Pf6N2E2_3528	0.21	+0.2
4,113,647	-		Pf6N2E2_3528	0.21	-0.1
4,113,647	-		Pf6N2E2_3528	0.21	+0.1
4,113,647	-		Pf6N2E2_3528	0.21	+0.5
4,113,706	+		Pf6N2E2_3528	0.32	+0.2
4,113,706	+		Pf6N2E2_3528	0.32	+0.0
4,113,706	+		Pf6N2E2_3528	0.32	+2.0
4,113,707	-		Pf6N2E2_3528	0.32	+0.3
4,113,707	-		Pf6N2E2_3528	0.32	+0.6
4,113,707	-		Pf6N2E2_3528	0.32	-0.7
4,113,784	-		Pf6N2E2_3528	0.47	-0.2
4,113,784	-		Pf6N2E2_3528	0.47	+0.1
4,113,784	-		Pf6N2E2_3528	0.47	-0.4
4,113,784	-		Pf6N2E2_3528	0.47	+0.3
4,114,033	+				+0.6
4,114,033	+				-0.4
4,114,033	+				+0.5
4,114,033	+				+0.4
4,114,033	+				+0.1
4,114,033	+				+0.5
4,114,033	+				-0.5
4,114,033	+				-1.5
4,114,033	+				+0.0
4,114,034	-				+1.1
4,114,034	-				+0.4
4,114,034	-				+0.6
4,114,034	-				-0.3
4,114,074	+				+0.1
4,114,075	-				-0.2
4,114,131	+				+0.6
4,114,132	-				-0.2
4,114,195	+				+0.3
4,114,195	+				+1.7
4,114,195	+				-0.1
4,114,195	+				-1.0
4,114,195	+				-0.6
4,114,196	-				+0.1
4,114,196	-				+0.6
4,114,196	-				+0.6
4,114,196	-				-0.7
4,114,196	-				-0.3
4,114,196	-				+0.5
4,114,196	-				-0.3