Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3098

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,584,185	+				+0.1
3,584,186	-				+1.0
3,584,186	-				-0.2
3,584,186	-				-0.0
3,584,186	-				-0.7
3,584,214	-		Pf6N2E2_3097	0.13	+0.7
3,584,214	-		Pf6N2E2_3097	0.13	+0.8
3,584,214	-		Pf6N2E2_3097	0.13	+0.8
3,584,377	+		Pf6N2E2_3097	0.36	+0.2
3,584,377	+		Pf6N2E2_3097	0.36	-0.1
3,584,377	+		Pf6N2E2_3097	0.36	+0.6
3,584,377	+		Pf6N2E2_3097	0.36	+1.2
3,584,378	-		Pf6N2E2_3097	0.36	+0.0
3,584,378	-		Pf6N2E2_3097	0.36	+0.1
3,584,378	-		Pf6N2E2_3097	0.36	+0.8
3,584,378	-		Pf6N2E2_3097	0.36	+0.6
3,584,378	-		Pf6N2E2_3097	0.36	+0.5
3,584,378	-		Pf6N2E2_3097	0.36	-0.0
3,584,378	-		Pf6N2E2_3097	0.36	-0.2
3,584,378	-		Pf6N2E2_3097	0.36	+0.2
3,584,434	+		Pf6N2E2_3097	0.44	+0.8
3,584,434	+		Pf6N2E2_3097	0.44	-0.1
3,584,434	+		Pf6N2E2_3097	0.44	+0.3
3,584,435	-		Pf6N2E2_3097	0.44	-0.5
3,584,435	-		Pf6N2E2_3097	0.44	-0.2
3,584,576	+		Pf6N2E2_3097	0.65	-0.1
3,584,577	-		Pf6N2E2_3097	0.65	+0.8
3,584,577	-		Pf6N2E2_3097	0.65	-0.4
3,584,852	-				-0.1
3,584,852	-				+0.1
3,584,852	-				+0.2
3,584,852	-				+0.6
3,584,945	+		Pf6N2E2_3098	0.13	-0.5
3,585,114	-		Pf6N2E2_3098	0.33	-1.0
3,585,288	-		Pf6N2E2_3098	0.55	-0.6
3,585,288	-		Pf6N2E2_3098	0.55	+0.2
3,585,288	-		Pf6N2E2_3098	0.55	-0.0
3,585,288	-		Pf6N2E2_3098	0.55	-0.9
3,585,526	-		Pf6N2E2_3098	0.84	-0.7
3,585,526	-		Pf6N2E2_3098	0.84	+0.3
3,585,662	+				-0.5
3,585,662	+				+0.0
3,585,662	+				+0.9
3,585,662	+				-0.6
3,585,662	+				-1.4
3,585,662	+				+1.0
3,585,663	-				+0.7
3,585,663	-				+0.3
3,585,727	+				+0.4
3,585,727	+				+0.3
3,585,727	+				-0.0
3,585,727	+				+0.8
3,585,727	+				+0.7
3,585,727	+				-0.2
3,585,727	+				+0.4
3,585,727	+				-0.3
3,585,727	+				+1.5
3,585,727	+				-0.8
3,585,728	-				+0.6
3,585,728	-				-0.3
3,585,728	-				+0.2
3,585,728	-				-0.1
3,585,728	-				-0.4
3,585,728	-				+0.5
3,585,729	+				+0.6
3,585,729	+				+0.1
3,585,729	+				+0.4
3,585,730	-				+0.0
3,585,730	-				+0.2
3,585,730	-				+0.5
3,585,731	+				+0.5
3,585,731	+				-0.4
3,585,731	+				+0.4
3,585,731	+				+0.3
3,585,731	+				+0.5
3,585,731	+				-0.4
3,585,731	+				+0.2
3,585,731	+				-0.1
3,585,731	+				-0.6
3,585,731	+				-0.6
3,585,731	+				+0.6
3,585,731	+				-0.6
3,585,731	+				-0.2
3,585,731	+				-1.0
3,585,731	+				-0.1
3,585,731	+				-0.5
3,585,732	-				+0.4
3,585,732	-				-0.2
3,585,732	-				-0.6
3,585,732	-				-0.6
3,585,732	-				+0.2
3,585,732	-				-0.6
3,585,732	-				-1.6
3,585,835	+		Pf6N2E2_3099	0.17	-0.6
3,585,835	+		Pf6N2E2_3099	0.17	+0.9
3,585,835	+		Pf6N2E2_3099	0.17	-0.4
3,585,835	+		Pf6N2E2_3099	0.17	-1.1
3,585,835	+		Pf6N2E2_3099	0.17	+0.1
3,585,836	-		Pf6N2E2_3099	0.17	-0.0
3,585,836	-		Pf6N2E2_3099	0.17	+0.4
3,585,836	-		Pf6N2E2_3099	0.17	-0.1
3,585,836	-		Pf6N2E2_3099	0.17	-1.8
3,585,836	-		Pf6N2E2_3099	0.17	-0.3
3,585,836	-		Pf6N2E2_3099	0.17	+0.7
3,585,836	-		Pf6N2E2_3099	0.17	+0.1
3,585,837	+		Pf6N2E2_3099	0.17	-0.3
3,585,837	+		Pf6N2E2_3099	0.17	-0.9
3,585,837	+		Pf6N2E2_3099	0.17	+0.7
3,585,837	+		Pf6N2E2_3099	0.17	+0.2
3,585,837	+		Pf6N2E2_3099	0.17	-0.6
3,585,838	-		Pf6N2E2_3099	0.17	+0.4
3,585,838	-		Pf6N2E2_3099	0.17	+0.6
3,585,838	-		Pf6N2E2_3099	0.17	-0.7
3,585,838	-		Pf6N2E2_3099	0.17	-0.7
3,585,838	-		Pf6N2E2_3099	0.17	+0.6
3,586,057	+		Pf6N2E2_3099	0.42	-0.4
3,586,057	+		Pf6N2E2_3099	0.42	+0.4
3,586,057	+		Pf6N2E2_3099	0.42	+0.2
3,586,057	+		Pf6N2E2_3099	0.42	+0.4
3,586,217	+		Pf6N2E2_3099	0.61	+0.2
3,586,217	+		Pf6N2E2_3099	0.61	+0.4
3,586,407	+		Pf6N2E2_3099	0.83	+0.1
3,586,408	-		Pf6N2E2_3099	0.83	-1.3
3,586,408	-		Pf6N2E2_3099	0.83	+0.2
3,586,408	-		Pf6N2E2_3099	0.83	+0.1
3,586,418	-		Pf6N2E2_3099	0.84	+0.0
3,586,418	-		Pf6N2E2_3099	0.84	+0.3
3,586,439	+		Pf6N2E2_3099	0.87	-0.8
3,586,439	+		Pf6N2E2_3099	0.87	-0.0
3,586,440	-		Pf6N2E2_3099	0.87	+0.7
3,586,440	-		Pf6N2E2_3099	0.87	-0.2
3,586,449	+		Pf6N2E2_3099	0.88	+0.3
3,586,450	-		Pf6N2E2_3099	0.88	+0.1
3,586,495	-				+0.7
3,586,536	+				+0.4
3,586,537	-				-0.9
3,586,537	-				-2.1
3,586,539	+				+0.5
3,586,540	-				+0.0
3,586,560	-				+0.7
3,586,560	-				-0.8
3,586,616	+		Pf6N2E2_3100	0.21	+0.3