Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2513
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
2,964,245 | - | Pf6N2E2_2512 | 0.77 | -1.0 | |
2,964,391 | - | -1.2 | |||
2,964,398 | - | -0.3 | |||
2,964,654 | + | Pf6N2E2_2513 | 0.10 | -1.4 | |
2,964,760 | - | Pf6N2E2_2513 | 0.19 | +0.8 | |
2,964,831 | + | Pf6N2E2_2513 | 0.24 | -0.5 | |
2,964,842 | - | Pf6N2E2_2513 | 0.25 | -0.2 | |
2,964,869 | - | Pf6N2E2_2513 | 0.27 | -0.2 | |
2,964,912 | - | Pf6N2E2_2513 | 0.31 | -0.3 | |
2,964,996 | - | Pf6N2E2_2513 | 0.37 | -2.2 | |
2,965,015 | - | Pf6N2E2_2513 | 0.39 | -0.7 | |
2,965,196 | - | Pf6N2E2_2513 | 0.53 | -0.5 | |
2,965,713 | - | -0.6 | |||
2,965,862 | - | +0.0 | |||
2,965,865 | - | +0.8 | |||
2,965,865 | - | -0.1 | |||
2,965,885 | - | -0.1 | |||
2,965,885 | - | -0.3 | |||
2,965,939 | - | +0.3 | |||
2,965,944 | - | +0.4 | |||
2,966,008 | - | +0.1 | |||
2,966,057 | - | -0.5 | |||
2,966,108 | - | Pf6N2E2_2514 | 0.13 | -0.3 | |
2,966,305 | - | Pf6N2E2_2514 | 0.32 | +0.5 | |
2,966,344 | - | Pf6N2E2_2514 | 0.35 | -0.3 | |
2,966,381 | - | Pf6N2E2_2514 | 0.39 | +0.2 | |
2,966,479 | + | Pf6N2E2_2514 | 0.48 | +0.7 | |
2,966,480 | - | Pf6N2E2_2514 | 0.48 | +0.4 | |
2,966,491 | - | Pf6N2E2_2514 | 0.49 | +0.1 | |
2,966,528 | + | Pf6N2E2_2514 | 0.53 | +0.4 | |
2,966,585 | + | Pf6N2E2_2514 | 0.58 | +1.6 | |
2,966,586 | - | Pf6N2E2_2514 | 0.58 | -1.3 | |
2,966,693 | - | Pf6N2E2_2514 | 0.69 | +0.2 |
Or see this region's nucleotide sequence