Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_2161 and Ga0059261_2162 overlap by 4 nucleotides Ga0059261_2162 and Ga0059261_2163 are separated by 24 nucleotides Ga0059261_2163 and Ga0059261_2164 are separated by 22 nucleotides
Ga0059261_2161: Ga0059261_2161 - hydroxymethylbilane synthase (EC 2.5.1.61), at 2,273,306 to 2,274,214
_2161
Ga0059261_2162: Ga0059261_2162 - Uroporphyrinogen-III synthase, at 2,274,211 to 2,274,879
_2162
Ga0059261_2163: Ga0059261_2163 - hypothetical protein, at 2,274,904 to 2,275,797
_2163
Ga0059261_2164: Ga0059261_2164 - Acyl-CoA dehydrogenases, at 2,275,820 to 2,277,004
_2164
Position (kb)
2274
2275 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2273.294 kb on + strand at 2273.294 kb on + strand at 2273.294 kb on + strand at 2273.294 kb on + strand at 2274.894 kb on + strand at 2274.894 kb on + strand at 2274.894 kb on + strand at 2274.894 kb on + strand at 2275.222 kb on + strand at 2275.223 kb on - strand, within Ga0059261_2163 at 2275.358 kb on + strand at 2275.736 kb on + strand at 2275.736 kb on + strand at 2275.736 kb on + strand at 2275.736 kb on + strand at 2275.736 kb on + strand at 2275.736 kb on + strand at 2275.736 kb on + strand at 2275.737 kb on - strand at 2275.737 kb on - strand at 2275.737 kb on - strand at 2275.795 kb on + strand at 2275.795 kb on + strand at 2275.796 kb on - strand at 2275.796 kb on - strand at 2275.796 kb on - strand at 2275.796 kb on - strand at 2275.796 kb on - strand at 2275.796 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 2,273,294 + +0.3 2,273,294 + -0.5 2,273,294 + +0.5 2,273,294 + +0.3 2,274,894 + -0.2 2,274,894 + -0.6 2,274,894 + -3.3 2,274,894 + -3.6 2,275,222 + -1.2 2,275,223 - Ga0059261_2163 0.36 -1.9 2,275,358 + +1.4 2,275,736 + -0.8 2,275,736 + -0.7 2,275,736 + -1.6 2,275,736 + -0.7 2,275,736 + +0.5 2,275,736 + -0.8 2,275,736 + -1.1 2,275,737 - -0.7 2,275,737 - -2.0 2,275,737 - -0.2 2,275,795 + -1.0 2,275,795 + +0.1 2,275,796 - -1.6 2,275,796 - +0.3 2,275,796 - +0.2 2,275,796 - +1.1 2,275,796 - -1.6 2,275,796 - -0.8
Or see this region's nucleotide sequence