Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ga0059261_1440 and Ga0059261_1441 are separated by 10 nucleotides Ga0059261_1441 and Ga0059261_1442 are separated by 60 nucleotides Ga0059261_1442 and Ga0059261_1443 are separated by 52 nucleotides
Ga0059261_1440: Ga0059261_1440 - Exodeoxyribonuclease VII large subunit (EC 3.1.11.6), at 1,519,441 to 1,520,820
_1440
Ga0059261_1441: Ga0059261_1441 - phosphoribosylamine--glycine ligase (EC 6.3.4.13), at 1,520,831 to 1,522,087
_1441
Ga0059261_1442: Ga0059261_1442 - hypothetical protein, at 1,522,148 to 1,522,360
_1442
Ga0059261_1443: Ga0059261_1443 - Hemolysins and related proteins containing CBS domains, at 1,522,413 to 1,523,720
_1443
Position (kb)
1520
1521
1522
1523 Strain fitness (log2 ratio)
-2
-1
0
1 at 1520.937 kb on - strand at 1522.106 kb on + strand at 1522.106 kb on + strand at 1522.107 kb on - strand at 1522.117 kb on + strand at 1522.118 kb on - strand at 1522.358 kb on + strand at 1522.358 kb on + strand at 1522.358 kb on + strand at 1522.358 kb on + strand at 1522.359 kb on - strand at 1522.359 kb on - strand at 1522.398 kb on + strand at 1522.398 kb on + strand at 1522.399 kb on - strand at 1522.414 kb on + strand at 1522.414 kb on + strand at 1522.414 kb on + strand at 1522.561 kb on + strand, within Ga0059261_1443 at 1522.561 kb on + strand, within Ga0059261_1443 at 1522.561 kb on + strand, within Ga0059261_1443 at 1522.561 kb on + strand, within Ga0059261_1443 at 1522.562 kb on - strand, within Ga0059261_1443 at 1522.562 kb on - strand, within Ga0059261_1443 at 1522.756 kb on + strand, within Ga0059261_1443 at 1522.756 kb on + strand, within Ga0059261_1443 at 1522.757 kb on - strand, within Ga0059261_1443
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 1,520,937 - -2.2 1,522,106 + +0.7 1,522,106 + -0.1 1,522,107 - -1.1 1,522,117 + -0.3 1,522,118 - -0.1 1,522,358 + -0.7 1,522,358 + -1.6 1,522,358 + +0.3 1,522,358 + -0.5 1,522,359 - +0.6 1,522,359 - -0.3 1,522,398 + -0.1 1,522,398 + +0.0 1,522,399 - +0.1 1,522,414 + +0.1 1,522,414 + +0.1 1,522,414 + -0.4 1,522,561 + Ga0059261_1443 0.11 -0.8 1,522,561 + Ga0059261_1443 0.11 -0.8 1,522,561 + Ga0059261_1443 0.11 -0.8 1,522,561 + Ga0059261_1443 0.11 +0.1 1,522,562 - Ga0059261_1443 0.11 -0.2 1,522,562 - Ga0059261_1443 0.11 -0.2 1,522,756 + Ga0059261_1443 0.26 +0.2 1,522,756 + Ga0059261_1443 0.26 -0.2 1,522,757 - Ga0059261_1443 0.26 -1.9
Or see this region's nucleotide sequence