Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3949 and Ac3H11_3950 are separated by 133 nucleotides Ac3H11_3950 and Ac3H11_3951 are separated by 77 nucleotides
Ac3H11_3949 - Outer membrane stress sensor protease DegS, at 172,121 to 173,644
_3949
Ac3H11_3950 - Catalase (EC 1.11.1.6), at 173,778 to 174,767
_3950
Ac3H11_3951 - Aldose 1-epimerase (EC 5.1.3.3), at 174,845 to 175,957
_3951
Position (kb) 173
174
175 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 172.800 kb on + strand, within Ac3H11_3949 at 172.818 kb on + strand, within Ac3H11_3949 at 172.818 kb on + strand, within Ac3H11_3949 at 172.818 kb on + strand, within Ac3H11_3949 at 172.818 kb on + strand, within Ac3H11_3949 at 172.818 kb on + strand, within Ac3H11_3949 at 172.819 kb on - strand, within Ac3H11_3949 at 172.819 kb on - strand, within Ac3H11_3949 at 172.819 kb on - strand, within Ac3H11_3949 at 172.819 kb on - strand, within Ac3H11_3949 at 173.310 kb on + strand, within Ac3H11_3949 at 173.650 kb on + strand at 173.650 kb on + strand at 173.651 kb on - strand at 173.651 kb on - strand at 173.652 kb on + strand at 173.652 kb on + strand at 173.652 kb on + strand at 173.652 kb on + strand at 173.653 kb on - strand at 173.653 kb on - strand at 173.653 kb on - strand at 173.653 kb on - strand at 173.653 kb on - strand at 173.653 kb on - strand at 173.653 kb on - strand at 173.653 kb on - strand at 173.701 kb on + strand at 173.712 kb on + strand at 173.813 kb on - strand at 173.965 kb on + strand, within Ac3H11_3950 at 173.965 kb on + strand, within Ac3H11_3950 at 173.966 kb on - strand, within Ac3H11_3950 at 174.529 kb on + strand, within Ac3H11_3950 at 174.754 kb on + strand at 174.754 kb on + strand at 174.755 kb on - strand at 174.755 kb on - strand at 174.755 kb on - strand at 174.847 kb on - strand at 174.847 kb on - strand at 174.864 kb on + strand at 175.053 kb on + strand, within Ac3H11_3951 at 175.054 kb on - strand, within Ac3H11_3951 at 175.054 kb on - strand, within Ac3H11_3951 at 175.054 kb on - strand, within Ac3H11_3951 at 175.054 kb on - strand, within Ac3H11_3951 at 175.200 kb on + strand, within Ac3H11_3951 at 175.201 kb on - strand, within Ac3H11_3951 at 175.201 kb on - strand, within Ac3H11_3951 at 175.347 kb on + strand, within Ac3H11_3951 at 175.348 kb on - strand, within Ac3H11_3951 at 175.362 kb on - strand, within Ac3H11_3951 at 175.456 kb on + strand, within Ac3H11_3951 at 175.761 kb on + strand, within Ac3H11_3951
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 172,800 + Ac3H11_3949 0.45 +3.4 172,818 + Ac3H11_3949 0.46 +0.0 172,818 + Ac3H11_3949 0.46 +0.1 172,818 + Ac3H11_3949 0.46 -0.2 172,818 + Ac3H11_3949 0.46 +0.8 172,818 + Ac3H11_3949 0.46 -0.5 172,819 - Ac3H11_3949 0.46 -0.2 172,819 - Ac3H11_3949 0.46 +0.9 172,819 - Ac3H11_3949 0.46 -1.3 172,819 - Ac3H11_3949 0.46 -0.2 173,310 + Ac3H11_3949 0.78 +0.3 173,650 + -0.8 173,650 + +0.9 173,651 - +0.2 173,651 - +0.4 173,652 + +0.9 173,652 + +0.2 173,652 + -0.9 173,652 + +0.6 173,653 - +0.2 173,653 - -0.9 173,653 - +1.9 173,653 - -0.2 173,653 - -0.5 173,653 - -0.2 173,653 - -1.8 173,653 - +0.3 173,701 + -0.2 173,712 + +2.0 173,813 - +1.0 173,965 + Ac3H11_3950 0.19 -1.0 173,965 + Ac3H11_3950 0.19 +0.9 173,966 - Ac3H11_3950 0.19 +1.3 174,529 + Ac3H11_3950 0.76 +0.1 174,754 + +0.4 174,754 + -0.2 174,755 - -0.5 174,755 - -0.0 174,755 - +0.5 174,847 - -0.2 174,847 - -0.4 174,864 + -0.0 175,053 + Ac3H11_3951 0.19 -0.1 175,054 - Ac3H11_3951 0.19 +1.6 175,054 - Ac3H11_3951 0.19 -0.2 175,054 - Ac3H11_3951 0.19 +0.5 175,054 - Ac3H11_3951 0.19 -0.9 175,200 + Ac3H11_3951 0.32 +0.5 175,201 - Ac3H11_3951 0.32 +0.5 175,201 - Ac3H11_3951 0.32 +0.1 175,347 + Ac3H11_3951 0.45 -0.2 175,348 - Ac3H11_3951 0.45 +0.8 175,362 - Ac3H11_3951 0.46 +1.2 175,456 + Ac3H11_3951 0.55 -1.0 175,761 + Ac3H11_3951 0.82 -0.2
Or see this region's nucleotide sequence