Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3426 and Ac3H11_3427 are separated by 224 nucleotides Ac3H11_3427 and Ac3H11_3428 overlap by 4 nucleotides Ac3H11_3428 and Ac3H11_3429 are separated by 17 nucleotides
Ac3H11_3426 - hypothetical protein, at 106,609 to 107,262
_3426
Ac3H11_3427 - Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16), at 107,487 to 111,218
_3427
Ac3H11_3428 - Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16), at 111,215 to 111,721
_3428
Ac3H11_3429 - Extracellular ligand-binding receptor, at 111,739 to 112,896
_3429
Position (kb)
107
108
109
110
111
112 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 106.634 kb on + strand at 106.634 kb on + strand at 106.634 kb on + strand at 106.635 kb on - strand at 106.721 kb on + strand, within Ac3H11_3426 at 106.730 kb on + strand, within Ac3H11_3426 at 106.754 kb on + strand, within Ac3H11_3426 at 106.754 kb on + strand, within Ac3H11_3426 at 106.754 kb on + strand, within Ac3H11_3426 at 106.755 kb on - strand, within Ac3H11_3426 at 106.755 kb on - strand, within Ac3H11_3426 at 106.755 kb on - strand, within Ac3H11_3426 at 106.931 kb on + strand, within Ac3H11_3426 at 106.932 kb on - strand, within Ac3H11_3426 at 107.111 kb on + strand, within Ac3H11_3426 at 107.111 kb on + strand, within Ac3H11_3426 at 107.111 kb on + strand, within Ac3H11_3426 at 107.111 kb on + strand, within Ac3H11_3426 at 107.111 kb on + strand, within Ac3H11_3426 at 107.112 kb on - strand, within Ac3H11_3426 at 107.112 kb on - strand, within Ac3H11_3426 at 107.112 kb on - strand, within Ac3H11_3426 at 107.112 kb on - strand, within Ac3H11_3426 at 107.360 kb on - strand at 107.402 kb on + strand at 107.402 kb on + strand at 107.403 kb on - strand at 107.403 kb on - strand at 107.403 kb on - strand at 107.489 kb on - strand at 107.564 kb on - strand at 107.564 kb on - strand at 107.576 kb on + strand at 107.576 kb on + strand at 107.576 kb on + strand at 107.576 kb on + strand at 107.576 kb on + strand at 107.577 kb on - strand at 107.578 kb on + strand at 107.578 kb on + strand at 107.578 kb on + strand at 107.579 kb on - strand at 107.926 kb on + strand, within Ac3H11_3427 at 107.926 kb on + strand, within Ac3H11_3427 at 107.927 kb on - strand, within Ac3H11_3427 at 108.037 kb on + strand, within Ac3H11_3427 at 108.043 kb on + strand, within Ac3H11_3427 at 108.043 kb on + strand, within Ac3H11_3427 at 108.043 kb on + strand, within Ac3H11_3427 at 108.043 kb on + strand, within Ac3H11_3427 at 108.043 kb on + strand, within Ac3H11_3427 at 108.043 kb on + strand, within Ac3H11_3427 at 108.044 kb on - strand, within Ac3H11_3427 at 108.214 kb on + strand, within Ac3H11_3427 at 108.376 kb on + strand, within Ac3H11_3427 at 108.377 kb on - strand, within Ac3H11_3427 at 108.382 kb on + strand, within Ac3H11_3427 at 108.383 kb on - strand, within Ac3H11_3427 at 108.427 kb on + strand, within Ac3H11_3427 at 108.428 kb on - strand, within Ac3H11_3427 at 108.428 kb on - strand, within Ac3H11_3427 at 108.442 kb on + strand, within Ac3H11_3427 at 108.550 kb on + strand, within Ac3H11_3427 at 108.551 kb on - strand, within Ac3H11_3427 at 108.679 kb on + strand, within Ac3H11_3427 at 108.679 kb on + strand, within Ac3H11_3427 at 109.120 kb on + strand, within Ac3H11_3427 at 109.375 kb on + strand, within Ac3H11_3427 at 109.376 kb on - strand, within Ac3H11_3427 at 109.384 kb on + strand, within Ac3H11_3427 at 109.385 kb on - strand, within Ac3H11_3427 at 109.385 kb on - strand, within Ac3H11_3427 at 109.567 kb on + strand, within Ac3H11_3427 at 109.567 kb on + strand, within Ac3H11_3427 at 109.567 kb on + strand, within Ac3H11_3427 at 109.567 kb on + strand, within Ac3H11_3427 at 109.568 kb on - strand, within Ac3H11_3427 at 109.568 kb on - strand, within Ac3H11_3427 at 109.568 kb on - strand, within Ac3H11_3427 at 109.669 kb on + strand, within Ac3H11_3427 at 109.709 kb on - strand, within Ac3H11_3427 at 109.778 kb on - strand, within Ac3H11_3427 at 109.778 kb on - strand, within Ac3H11_3427 at 110.176 kb on + strand, within Ac3H11_3427 at 110.176 kb on + strand, within Ac3H11_3427 at 110.176 kb on + strand, within Ac3H11_3427 at 110.176 kb on + strand, within Ac3H11_3427 at 110.177 kb on - strand, within Ac3H11_3427 at 110.177 kb on - strand, within Ac3H11_3427 at 110.177 kb on - strand, within Ac3H11_3427 at 110.177 kb on - strand, within Ac3H11_3427 at 110.177 kb on - strand, within Ac3H11_3427 at 110.278 kb on - strand, within Ac3H11_3427 at 110.510 kb on - strand, within Ac3H11_3427 at 110.510 kb on - strand, within Ac3H11_3427 at 110.633 kb on - strand, within Ac3H11_3427 at 111.054 kb on + strand at 111.054 kb on + strand at 111.054 kb on + strand at 111.055 kb on - strand at 111.317 kb on + strand, within Ac3H11_3428 at 111.591 kb on + strand, within Ac3H11_3428 at 111.591 kb on + strand, within Ac3H11_3428 at 111.591 kb on + strand, within Ac3H11_3428 at 111.592 kb on - strand, within Ac3H11_3428 at 111.592 kb on - strand, within Ac3H11_3428 at 111.767 kb on + strand at 111.767 kb on + strand at 111.767 kb on + strand at 111.767 kb on + strand at 111.768 kb on - strand at 111.768 kb on - strand at 111.768 kb on - strand at 111.768 kb on - strand at 111.815 kb on + strand at 111.816 kb on - strand at 111.816 kb on - strand at 111.938 kb on + strand, within Ac3H11_3429 at 111.938 kb on + strand, within Ac3H11_3429 at 111.939 kb on - strand, within Ac3H11_3429 at 111.939 kb on - strand, within Ac3H11_3429 at 111.939 kb on - strand, within Ac3H11_3429 at 111.956 kb on + strand, within Ac3H11_3429 at 111.956 kb on + strand, within Ac3H11_3429 at 111.956 kb on + strand, within Ac3H11_3429 at 111.956 kb on + strand, within Ac3H11_3429 at 111.957 kb on - strand, within Ac3H11_3429 at 111.957 kb on - strand, within Ac3H11_3429 at 111.998 kb on + strand, within Ac3H11_3429 at 112.111 kb on - strand, within Ac3H11_3429 at 112.127 kb on + strand, within Ac3H11_3429 at 112.127 kb on + strand, within Ac3H11_3429
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 106,634 + -0.6 106,634 + -0.4 106,634 + +0.2 106,635 - +1.1 106,721 + Ac3H11_3426 0.17 +0.8 106,730 + Ac3H11_3426 0.19 -0.1 106,754 + Ac3H11_3426 0.22 -0.2 106,754 + Ac3H11_3426 0.22 -0.2 106,754 + Ac3H11_3426 0.22 -0.0 106,755 - Ac3H11_3426 0.22 -0.4 106,755 - Ac3H11_3426 0.22 -0.6 106,755 - Ac3H11_3426 0.22 -0.4 106,931 + Ac3H11_3426 0.49 -0.9 106,932 - Ac3H11_3426 0.49 -0.8 107,111 + Ac3H11_3426 0.77 +0.1 107,111 + Ac3H11_3426 0.77 +0.2 107,111 + Ac3H11_3426 0.77 +0.0 107,111 + Ac3H11_3426 0.77 -2.1 107,111 + Ac3H11_3426 0.77 -0.2 107,112 - Ac3H11_3426 0.77 -0.4 107,112 - Ac3H11_3426 0.77 +1.9 107,112 - Ac3H11_3426 0.77 -0.4 107,112 - Ac3H11_3426 0.77 -0.0 107,360 - -1.1 107,402 + +0.0 107,402 + -0.4 107,403 - +0.0 107,403 - -0.1 107,403 - -1.1 107,489 - +0.4 107,564 - -0.1 107,564 - -0.5 107,576 + +0.5 107,576 + -0.7 107,576 + -0.2 107,576 + -1.0 107,576 + +1.2 107,577 - +0.9 107,578 + -1.2 107,578 + -0.0 107,578 + -0.5 107,579 - -0.5 107,926 + Ac3H11_3427 0.12 -0.5 107,926 + Ac3H11_3427 0.12 -1.0 107,927 - Ac3H11_3427 0.12 +0.8 108,037 + Ac3H11_3427 0.15 -1.1 108,043 + Ac3H11_3427 0.15 -0.1 108,043 + Ac3H11_3427 0.15 +0.6 108,043 + Ac3H11_3427 0.15 +0.5 108,043 + Ac3H11_3427 0.15 +0.3 108,043 + Ac3H11_3427 0.15 -0.1 108,043 + Ac3H11_3427 0.15 +0.2 108,044 - Ac3H11_3427 0.15 +1.2 108,214 + Ac3H11_3427 0.19 +1.0 108,376 + Ac3H11_3427 0.24 +0.8 108,377 - Ac3H11_3427 0.24 +0.8 108,382 + Ac3H11_3427 0.24 -0.3 108,383 - Ac3H11_3427 0.24 -1.2 108,427 + Ac3H11_3427 0.25 -0.5 108,428 - Ac3H11_3427 0.25 +0.1 108,428 - Ac3H11_3427 0.25 -0.4 108,442 + Ac3H11_3427 0.26 +0.5 108,550 + Ac3H11_3427 0.28 +0.2 108,551 - Ac3H11_3427 0.29 +0.3 108,679 + Ac3H11_3427 0.32 -1.0 108,679 + Ac3H11_3427 0.32 -0.8 109,120 + Ac3H11_3427 0.44 -0.4 109,375 + Ac3H11_3427 0.51 +1.0 109,376 - Ac3H11_3427 0.51 -0.4 109,384 + Ac3H11_3427 0.51 -0.1 109,385 - Ac3H11_3427 0.51 -0.1 109,385 - Ac3H11_3427 0.51 -0.5 109,567 + Ac3H11_3427 0.56 -1.1 109,567 + Ac3H11_3427 0.56 +1.8 109,567 + Ac3H11_3427 0.56 +0.1 109,567 + Ac3H11_3427 0.56 -0.6 109,568 - Ac3H11_3427 0.56 -0.1 109,568 - Ac3H11_3427 0.56 +0.6 109,568 - Ac3H11_3427 0.56 +1.3 109,669 + Ac3H11_3427 0.58 +0.5 109,709 - Ac3H11_3427 0.60 +1.0 109,778 - Ac3H11_3427 0.61 -0.2 109,778 - Ac3H11_3427 0.61 -0.1 110,176 + Ac3H11_3427 0.72 +0.8 110,176 + Ac3H11_3427 0.72 -0.3 110,176 + Ac3H11_3427 0.72 +0.3 110,176 + Ac3H11_3427 0.72 +1.3 110,177 - Ac3H11_3427 0.72 -1.4 110,177 - Ac3H11_3427 0.72 +1.9 110,177 - Ac3H11_3427 0.72 -0.1 110,177 - Ac3H11_3427 0.72 -0.3 110,177 - Ac3H11_3427 0.72 -1.1 110,278 - Ac3H11_3427 0.75 +1.8 110,510 - Ac3H11_3427 0.81 +1.2 110,510 - Ac3H11_3427 0.81 -0.1 110,633 - Ac3H11_3427 0.84 +1.1 111,054 + +0.9 111,054 + -0.1 111,054 + -0.0 111,055 - -0.5 111,317 + Ac3H11_3428 0.20 +1.1 111,591 + Ac3H11_3428 0.74 +0.4 111,591 + Ac3H11_3428 0.74 -0.6 111,591 + Ac3H11_3428 0.74 +1.1 111,592 - Ac3H11_3428 0.74 +0.9 111,592 - Ac3H11_3428 0.74 -0.2 111,767 + -0.6 111,767 + +0.6 111,767 + +0.2 111,767 + +1.2 111,768 - -0.9 111,768 - -1.5 111,768 - +0.1 111,768 - -0.7 111,815 + +0.8 111,816 - +1.4 111,816 - +0.3 111,938 + Ac3H11_3429 0.17 -0.7 111,938 + Ac3H11_3429 0.17 -0.1 111,939 - Ac3H11_3429 0.17 -0.9 111,939 - Ac3H11_3429 0.17 -1.6 111,939 - Ac3H11_3429 0.17 +0.8 111,956 + Ac3H11_3429 0.19 -0.2 111,956 + Ac3H11_3429 0.19 +1.9 111,956 + Ac3H11_3429 0.19 +0.1 111,956 + Ac3H11_3429 0.19 -1.4 111,957 - Ac3H11_3429 0.19 +0.1 111,957 - Ac3H11_3429 0.19 +1.9 111,998 + Ac3H11_3429 0.22 -0.2 112,111 - Ac3H11_3429 0.32 -0.5 112,127 + Ac3H11_3429 0.34 +0.6 112,127 + Ac3H11_3429 0.34 +0.2
Or see this region's nucleotide sequence