Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3164 and Ac3H11_3165 are separated by 440 nucleotides Ac3H11_3165 and Ac3H11_3166 are separated by 317 nucleotides
Ac3H11_3164 - S-formylglutathione hydrolase (EC 3.1.2.12), at 65,211 to 66,095
_3164
Ac3H11_3165 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 66,536 to 69,196
_3165
Ac3H11_3166 - HD domain protein, at 69,514 to 70,398
_3166
Position (kb) 66
67
68
69
70 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 65.565 kb on + strand, within Ac3H11_3164 at 65.566 kb on - strand, within Ac3H11_3164 at 65.566 kb on - strand, within Ac3H11_3164 at 65.616 kb on + strand, within Ac3H11_3164 at 65.616 kb on + strand, within Ac3H11_3164 at 65.617 kb on - strand, within Ac3H11_3164 at 65.617 kb on - strand, within Ac3H11_3164 at 65.820 kb on + strand, within Ac3H11_3164 at 66.025 kb on - strand at 66.036 kb on + strand at 66.036 kb on + strand at 66.036 kb on + strand at 66.036 kb on + strand at 66.039 kb on + strand at 66.039 kb on + strand at 66.039 kb on + strand at 66.039 kb on + strand at 66.039 kb on + strand at 66.039 kb on + strand at 66.040 kb on - strand at 66.040 kb on - strand at 66.070 kb on + strand at 66.070 kb on + strand at 66.071 kb on - strand at 66.071 kb on - strand at 66.071 kb on - strand at 66.071 kb on - strand at 66.101 kb on - strand at 66.101 kb on - strand at 66.119 kb on + strand at 66.120 kb on - strand at 66.120 kb on - strand at 66.256 kb on + strand at 66.256 kb on + strand at 66.256 kb on + strand at 66.256 kb on + strand at 66.256 kb on + strand at 66.256 kb on + strand at 66.257 kb on - strand at 66.257 kb on - strand at 66.257 kb on - strand at 66.356 kb on - strand at 66.378 kb on + strand at 66.378 kb on + strand at 66.378 kb on + strand at 66.378 kb on + strand at 66.378 kb on + strand at 66.379 kb on - strand at 66.379 kb on - strand at 66.379 kb on - strand at 66.379 kb on - strand at 66.379 kb on - strand at 66.394 kb on - strand at 66.445 kb on - strand at 66.445 kb on - strand at 66.514 kb on + strand at 66.515 kb on - strand at 66.515 kb on - strand at 66.625 kb on + strand at 66.625 kb on + strand at 66.625 kb on + strand at 66.625 kb on + strand at 66.626 kb on - strand at 66.626 kb on - strand at 66.626 kb on - strand at 66.732 kb on + strand at 66.733 kb on - strand at 66.733 kb on - strand at 66.837 kb on + strand, within Ac3H11_3165 at 66.857 kb on + strand, within Ac3H11_3165 at 66.857 kb on + strand, within Ac3H11_3165 at 66.858 kb on - strand, within Ac3H11_3165 at 66.861 kb on + strand, within Ac3H11_3165 at 66.861 kb on + strand, within Ac3H11_3165 at 66.861 kb on + strand, within Ac3H11_3165 at 66.861 kb on + strand, within Ac3H11_3165 at 66.861 kb on + strand, within Ac3H11_3165 at 66.861 kb on + strand, within Ac3H11_3165 at 66.861 kb on + strand, within Ac3H11_3165 at 66.861 kb on + strand, within Ac3H11_3165 at 66.861 kb on + strand, within Ac3H11_3165 at 66.862 kb on - strand, within Ac3H11_3165 at 66.862 kb on - strand, within Ac3H11_3165 at 66.862 kb on - strand, within Ac3H11_3165 at 66.862 kb on - strand, within Ac3H11_3165 at 66.862 kb on - strand, within Ac3H11_3165 at 66.862 kb on - strand, within Ac3H11_3165 at 66.862 kb on - strand, within Ac3H11_3165 at 66.862 kb on - strand, within Ac3H11_3165 at 66.862 kb on - strand, within Ac3H11_3165 at 66.862 kb on - strand, within Ac3H11_3165 at 66.862 kb on - strand, within Ac3H11_3165 at 66.869 kb on - strand, within Ac3H11_3165 at 66.869 kb on - strand, within Ac3H11_3165 at 66.869 kb on - strand, within Ac3H11_3165 at 66.869 kb on - strand, within Ac3H11_3165 at 66.869 kb on - strand, within Ac3H11_3165 at 66.948 kb on + strand, within Ac3H11_3165 at 66.949 kb on - strand, within Ac3H11_3165 at 66.998 kb on + strand, within Ac3H11_3165 at 66.998 kb on + strand, within Ac3H11_3165 at 66.998 kb on + strand, within Ac3H11_3165 at 66.999 kb on - strand, within Ac3H11_3165 at 66.999 kb on - strand, within Ac3H11_3165 at 66.999 kb on - strand, within Ac3H11_3165 at 66.999 kb on - strand, within Ac3H11_3165 at 66.999 kb on - strand, within Ac3H11_3165 at 66.999 kb on - strand, within Ac3H11_3165 at 67.023 kb on + strand, within Ac3H11_3165 at 67.024 kb on - strand, within Ac3H11_3165 at 67.024 kb on - strand, within Ac3H11_3165 at 67.045 kb on + strand, within Ac3H11_3165 at 67.105 kb on - strand, within Ac3H11_3165 at 67.105 kb on - strand, within Ac3H11_3165 at 67.291 kb on + strand, within Ac3H11_3165 at 67.291 kb on + strand, within Ac3H11_3165 at 67.291 kb on + strand, within Ac3H11_3165 at 67.291 kb on + strand, within Ac3H11_3165 at 67.291 kb on + strand, within Ac3H11_3165 at 67.291 kb on + strand, within Ac3H11_3165 at 67.291 kb on + strand, within Ac3H11_3165 at 67.291 kb on + strand, within Ac3H11_3165 at 67.292 kb on - strand, within Ac3H11_3165 at 67.292 kb on - strand, within Ac3H11_3165 at 67.292 kb on - strand, within Ac3H11_3165 at 67.292 kb on - strand, within Ac3H11_3165 at 67.292 kb on - strand, within Ac3H11_3165 at 67.292 kb on - strand, within Ac3H11_3165 at 67.293 kb on + strand, within Ac3H11_3165 at 67.293 kb on + strand, within Ac3H11_3165 at 67.293 kb on + strand, within Ac3H11_3165 at 67.294 kb on - strand, within Ac3H11_3165 at 67.294 kb on - strand, within Ac3H11_3165 at 67.330 kb on + strand, within Ac3H11_3165 at 67.331 kb on - strand, within Ac3H11_3165 at 67.350 kb on + strand, within Ac3H11_3165 at 67.350 kb on + strand, within Ac3H11_3165 at 67.350 kb on + strand, within Ac3H11_3165 at 67.350 kb on + strand, within Ac3H11_3165 at 67.350 kb on + strand, within Ac3H11_3165 at 67.351 kb on - strand, within Ac3H11_3165 at 67.351 kb on - strand, within Ac3H11_3165 at 67.351 kb on - strand, within Ac3H11_3165 at 67.351 kb on - strand, within Ac3H11_3165 at 67.351 kb on - strand, within Ac3H11_3165 at 67.351 kb on - strand, within Ac3H11_3165 at 67.468 kb on + strand, within Ac3H11_3165 at 67.468 kb on + strand, within Ac3H11_3165 at 67.736 kb on + strand, within Ac3H11_3165 at 67.736 kb on + strand, within Ac3H11_3165 at 67.736 kb on + strand, within Ac3H11_3165 at 67.736 kb on + strand, within Ac3H11_3165 at 67.737 kb on - strand, within Ac3H11_3165 at 67.737 kb on - strand, within Ac3H11_3165 at 67.737 kb on - strand, within Ac3H11_3165 at 67.737 kb on - strand, within Ac3H11_3165 at 67.737 kb on - strand, within Ac3H11_3165 at 67.737 kb on - strand, within Ac3H11_3165 at 67.737 kb on - strand, within Ac3H11_3165 at 67.737 kb on - strand, within Ac3H11_3165 at 67.747 kb on - strand, within Ac3H11_3165 at 67.747 kb on - strand, within Ac3H11_3165 at 67.812 kb on + strand, within Ac3H11_3165 at 67.891 kb on + strand, within Ac3H11_3165 at 68.157 kb on + strand, within Ac3H11_3165 at 68.536 kb on + strand, within Ac3H11_3165 at 68.536 kb on + strand, within Ac3H11_3165 at 68.537 kb on - strand, within Ac3H11_3165 at 68.537 kb on - strand, within Ac3H11_3165 at 68.537 kb on - strand, within Ac3H11_3165 at 68.586 kb on - strand, within Ac3H11_3165 at 68.593 kb on + strand, within Ac3H11_3165 at 68.618 kb on + strand, within Ac3H11_3165 at 68.665 kb on - strand, within Ac3H11_3165 at 68.667 kb on - strand, within Ac3H11_3165 at 68.850 kb on + strand, within Ac3H11_3165 at 68.851 kb on - strand, within Ac3H11_3165 at 69.024 kb on + strand at 69.114 kb on + strand at 69.153 kb on + strand at 69.153 kb on + strand at 69.154 kb on - strand at 69.295 kb on + strand at 69.295 kb on + strand at 69.296 kb on - strand at 69.296 kb on - strand at 69.296 kb on - strand at 69.296 kb on - strand at 69.405 kb on + strand at 69.406 kb on - strand at 69.423 kb on + strand at 69.424 kb on - strand at 69.429 kb on - strand at 69.429 kb on - strand at 69.429 kb on - strand at 69.497 kb on + strand at 69.497 kb on + strand at 69.497 kb on + strand at 69.498 kb on - strand at 69.498 kb on - strand at 69.548 kb on + strand at 69.548 kb on + strand at 69.608 kb on + strand, within Ac3H11_3166 at 69.608 kb on + strand, within Ac3H11_3166 at 69.609 kb on - strand, within Ac3H11_3166 at 69.710 kb on + strand, within Ac3H11_3166 at 69.710 kb on + strand, within Ac3H11_3166 at 69.710 kb on + strand, within Ac3H11_3166 at 69.728 kb on - strand, within Ac3H11_3166 at 69.750 kb on + strand, within Ac3H11_3166 at 69.751 kb on - strand, within Ac3H11_3166 at 69.751 kb on - strand, within Ac3H11_3166 at 69.791 kb on + strand, within Ac3H11_3166 at 69.792 kb on - strand, within Ac3H11_3166 at 69.792 kb on - strand, within Ac3H11_3166 at 69.840 kb on - strand, within Ac3H11_3166 at 69.840 kb on - strand, within Ac3H11_3166 at 69.840 kb on - strand, within Ac3H11_3166 at 70.074 kb on - strand, within Ac3H11_3166
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 65,565 + Ac3H11_3164 0.40 +1.9 65,566 - Ac3H11_3164 0.40 -0.6 65,566 - Ac3H11_3164 0.40 -0.5 65,616 + Ac3H11_3164 0.46 -0.6 65,616 + Ac3H11_3164 0.46 -0.9 65,617 - Ac3H11_3164 0.46 +1.5 65,617 - Ac3H11_3164 0.46 +1.4 65,820 + Ac3H11_3164 0.69 +1.9 66,025 - -1.8 66,036 + -1.2 66,036 + -0.5 66,036 + -1.8 66,036 + -0.2 66,039 + +0.5 66,039 + +0.2 66,039 + -0.2 66,039 + +0.4 66,039 + -1.4 66,039 + -0.3 66,040 - +0.8 66,040 - +0.4 66,070 + -0.2 66,070 + -1.0 66,071 - +0.9 66,071 - +0.1 66,071 - -0.5 66,071 - +1.0 66,101 - -0.8 66,101 - -0.5 66,119 + +0.0 66,120 - +2.1 66,120 - -0.6 66,256 + -0.7 66,256 + +0.9 66,256 + -0.3 66,256 + -0.4 66,256 + +0.6 66,256 + -0.5 66,257 - -0.0 66,257 - -0.1 66,257 - -0.5 66,356 - -0.9 66,378 + +1.2 66,378 + +1.0 66,378 + +0.5 66,378 + +1.2 66,378 + +0.0 66,379 - -0.3 66,379 - +0.9 66,379 - -0.3 66,379 - +0.0 66,379 - -0.0 66,394 - +0.0 66,445 - +0.7 66,445 - +0.3 66,514 + -0.0 66,515 - +0.9 66,515 - -0.4 66,625 + +0.4 66,625 + +0.0 66,625 + -1.9 66,625 + -0.6 66,626 - -0.7 66,626 - -0.7 66,626 - +0.4 66,732 + +0.1 66,733 - +0.4 66,733 - +0.2 66,837 + Ac3H11_3165 0.11 -1.0 66,857 + Ac3H11_3165 0.12 +1.0 66,857 + Ac3H11_3165 0.12 +0.0 66,858 - Ac3H11_3165 0.12 +0.7 66,861 + Ac3H11_3165 0.12 +0.3 66,861 + Ac3H11_3165 0.12 +0.4 66,861 + Ac3H11_3165 0.12 +0.2 66,861 + Ac3H11_3165 0.12 -1.4 66,861 + Ac3H11_3165 0.12 +0.6 66,861 + Ac3H11_3165 0.12 -2.4 66,861 + Ac3H11_3165 0.12 -1.3 66,861 + Ac3H11_3165 0.12 +0.5 66,861 + Ac3H11_3165 0.12 -0.5 66,862 - Ac3H11_3165 0.12 -0.1 66,862 - Ac3H11_3165 0.12 +0.6 66,862 - Ac3H11_3165 0.12 +1.5 66,862 - Ac3H11_3165 0.12 +1.3 66,862 - Ac3H11_3165 0.12 +1.9 66,862 - Ac3H11_3165 0.12 +0.0 66,862 - Ac3H11_3165 0.12 +0.5 66,862 - Ac3H11_3165 0.12 -0.0 66,862 - Ac3H11_3165 0.12 +1.6 66,862 - Ac3H11_3165 0.12 -0.5 66,862 - Ac3H11_3165 0.12 -0.7 66,869 - Ac3H11_3165 0.13 +0.0 66,869 - Ac3H11_3165 0.13 -0.9 66,869 - Ac3H11_3165 0.13 +1.1 66,869 - Ac3H11_3165 0.13 +0.4 66,869 - Ac3H11_3165 0.13 -0.5 66,948 + Ac3H11_3165 0.15 -0.1 66,949 - Ac3H11_3165 0.16 -0.7 66,998 + Ac3H11_3165 0.17 -0.6 66,998 + Ac3H11_3165 0.17 +0.2 66,998 + Ac3H11_3165 0.17 -0.5 66,999 - Ac3H11_3165 0.17 -0.4 66,999 - Ac3H11_3165 0.17 -0.2 66,999 - Ac3H11_3165 0.17 -0.3 66,999 - Ac3H11_3165 0.17 +0.6 66,999 - Ac3H11_3165 0.17 +0.4 66,999 - Ac3H11_3165 0.17 -0.8 67,023 + Ac3H11_3165 0.18 -2.0 67,024 - Ac3H11_3165 0.18 -0.1 67,024 - Ac3H11_3165 0.18 +1.1 67,045 + Ac3H11_3165 0.19 -0.7 67,105 - Ac3H11_3165 0.21 -0.6 67,105 - Ac3H11_3165 0.21 +0.6 67,291 + Ac3H11_3165 0.28 -0.2 67,291 + Ac3H11_3165 0.28 +0.2 67,291 + Ac3H11_3165 0.28 -1.2 67,291 + Ac3H11_3165 0.28 -1.6 67,291 + Ac3H11_3165 0.28 -0.3 67,291 + Ac3H11_3165 0.28 +1.0 67,291 + Ac3H11_3165 0.28 +1.8 67,291 + Ac3H11_3165 0.28 +0.7 67,292 - Ac3H11_3165 0.28 -0.4 67,292 - Ac3H11_3165 0.28 -0.4 67,292 - Ac3H11_3165 0.28 -0.0 67,292 - Ac3H11_3165 0.28 +0.5 67,292 - Ac3H11_3165 0.28 +2.3 67,292 - Ac3H11_3165 0.28 -1.0 67,293 + Ac3H11_3165 0.28 -0.0 67,293 + Ac3H11_3165 0.28 +0.5 67,293 + Ac3H11_3165 0.28 -0.3 67,294 - Ac3H11_3165 0.28 +0.8 67,294 - Ac3H11_3165 0.28 -0.4 67,330 + Ac3H11_3165 0.30 -0.7 67,331 - Ac3H11_3165 0.30 -0.1 67,350 + Ac3H11_3165 0.31 -1.0 67,350 + Ac3H11_3165 0.31 -0.5 67,350 + Ac3H11_3165 0.31 +0.4 67,350 + Ac3H11_3165 0.31 +0.7 67,350 + Ac3H11_3165 0.31 -0.8 67,351 - Ac3H11_3165 0.31 +0.1 67,351 - Ac3H11_3165 0.31 -0.7 67,351 - Ac3H11_3165 0.31 +0.9 67,351 - Ac3H11_3165 0.31 +0.3 67,351 - Ac3H11_3165 0.31 +2.7 67,351 - Ac3H11_3165 0.31 -0.7 67,468 + Ac3H11_3165 0.35 +0.6 67,468 + Ac3H11_3165 0.35 -0.4 67,736 + Ac3H11_3165 0.45 -0.1 67,736 + Ac3H11_3165 0.45 +0.1 67,736 + Ac3H11_3165 0.45 +0.2 67,736 + Ac3H11_3165 0.45 +0.2 67,737 - Ac3H11_3165 0.45 +0.0 67,737 - Ac3H11_3165 0.45 +0.6 67,737 - Ac3H11_3165 0.45 -0.7 67,737 - Ac3H11_3165 0.45 -1.1 67,737 - Ac3H11_3165 0.45 -1.3 67,737 - Ac3H11_3165 0.45 +1.3 67,737 - Ac3H11_3165 0.45 +0.1 67,737 - Ac3H11_3165 0.45 -0.3 67,747 - Ac3H11_3165 0.46 +0.7 67,747 - Ac3H11_3165 0.46 +0.7 67,812 + Ac3H11_3165 0.48 -0.1 67,891 + Ac3H11_3165 0.51 +0.8 68,157 + Ac3H11_3165 0.61 +0.3 68,536 + Ac3H11_3165 0.75 -0.2 68,536 + Ac3H11_3165 0.75 -0.7 68,537 - Ac3H11_3165 0.75 -0.4 68,537 - Ac3H11_3165 0.75 -0.6 68,537 - Ac3H11_3165 0.75 +0.0 68,586 - Ac3H11_3165 0.77 -0.5 68,593 + Ac3H11_3165 0.77 -0.7 68,618 + Ac3H11_3165 0.78 -0.5 68,665 - Ac3H11_3165 0.80 +1.6 68,667 - Ac3H11_3165 0.80 -0.0 68,850 + Ac3H11_3165 0.87 -0.8 68,851 - Ac3H11_3165 0.87 +0.4 69,024 + -0.6 69,114 + -0.0 69,153 + -1.6 69,153 + +1.3 69,154 - -1.7 69,295 + -0.3 69,295 + +0.7 69,296 - +0.7 69,296 - +0.9 69,296 - +1.8 69,296 - +0.5 69,405 + +2.0 69,406 - +1.0 69,423 + +0.4 69,424 - +0.2 69,429 - -0.2 69,429 - +0.1 69,429 - +0.6 69,497 + +1.8 69,497 + +0.5 69,497 + +0.0 69,498 - +0.2 69,498 - -0.0 69,548 + +0.2 69,548 + -1.0 69,608 + Ac3H11_3166 0.11 +0.5 69,608 + Ac3H11_3166 0.11 +0.5 69,609 - Ac3H11_3166 0.11 +0.1 69,710 + Ac3H11_3166 0.22 -0.2 69,710 + Ac3H11_3166 0.22 -0.9 69,710 + Ac3H11_3166 0.22 -0.4 69,728 - Ac3H11_3166 0.24 +1.8 69,750 + Ac3H11_3166 0.27 +0.0 69,751 - Ac3H11_3166 0.27 +0.3 69,751 - Ac3H11_3166 0.27 +2.8 69,791 + Ac3H11_3166 0.31 -0.0 69,792 - Ac3H11_3166 0.31 +0.5 69,792 - Ac3H11_3166 0.31 +0.2 69,840 - Ac3H11_3166 0.37 -0.4 69,840 - Ac3H11_3166 0.37 -0.4 69,840 - Ac3H11_3166 0.37 +0.5 70,074 - Ac3H11_3166 0.63 -0.3
Or see this region's nucleotide sequence