Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS32835 and AZOBR_RS32840 are separated by 7 nucleotides AZOBR_RS32840 and AZOBR_RS32845 are separated by 425 nucleotides AZOBR_RS32845 and AZOBR_RS32850 are separated by 5 nucleotides AZOBR_RS32850 and AZOBR_RS32855 are separated by 3 nucleotides
AZOBR_RS32835: AZOBR_RS32835 - hypothetical protein, at 49,272 to 49,826
_RS32835
AZOBR_RS32840: AZOBR_RS32840 - hypothetical protein, at 49,834 to 50,082
_RS32840
AZOBR_RS32845: AZOBR_RS32845 - membrane protein of unknown function, at 50,508 to 51,824
_RS32845
AZOBR_RS32850: AZOBR_RS32850 - hypothetical protein, at 51,830 to 52,285
_RS32850
AZOBR_RS32855: AZOBR_RS32855 - hypothetical protein, at 52,289 to 52,894
_RS32855
Position (kb)
50
51
52 Strain fitness (log2 ratio)
-1
0
1
2
3 at 50.171 kb on + strand at 50.171 kb on + strand at 50.171 kb on + strand at 50.171 kb on + strand at 50.197 kb on + strand at 50.197 kb on + strand at 50.198 kb on - strand at 50.205 kb on + strand at 50.229 kb on - strand at 50.301 kb on + strand at 50.335 kb on + strand at 50.335 kb on + strand at 50.335 kb on + strand at 50.366 kb on + strand at 50.366 kb on + strand at 50.446 kb on + strand at 50.447 kb on - strand at 50.739 kb on + strand, within AZOBR_RS32845 at 50.913 kb on + strand, within AZOBR_RS32845 at 50.914 kb on - strand, within AZOBR_RS32845 at 50.986 kb on - strand, within AZOBR_RS32845 at 51.044 kb on - strand, within AZOBR_RS32845 at 51.069 kb on + strand, within AZOBR_RS32845 at 51.070 kb on - strand, within AZOBR_RS32845 at 51.175 kb on - strand, within AZOBR_RS32845 at 51.243 kb on + strand, within AZOBR_RS32845 at 51.244 kb on - strand, within AZOBR_RS32845 at 51.284 kb on + strand, within AZOBR_RS32845 at 51.285 kb on - strand, within AZOBR_RS32845 at 51.420 kb on + strand, within AZOBR_RS32845 at 51.644 kb on + strand, within AZOBR_RS32845 at 51.644 kb on + strand, within AZOBR_RS32845 at 51.644 kb on + strand, within AZOBR_RS32845 at 51.786 kb on + strand at 51.831 kb on + strand at 51.832 kb on - strand at 51.999 kb on + strand, within AZOBR_RS32850 at 52.314 kb on + strand at 52.314 kb on + strand at 52.784 kb on + strand, within AZOBR_RS32855 at 52.784 kb on + strand, within AZOBR_RS32855 at 52.785 kb on - strand, within AZOBR_RS32855 at 52.785 kb on - strand, within AZOBR_RS32855 at 52.803 kb on + strand at 52.803 kb on + strand, within AZOBR_RS32855 at 52.803 kb on + strand, within AZOBR_RS32855 at 52.803 kb on + strand, within AZOBR_RS32855 at 52.804 kb on - strand, within AZOBR_RS32855
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 50,171 + +1.6 50,171 + +1.3 50,171 + +1.2 50,171 + +1.5 50,197 + +2.4 50,197 + +0.3 50,198 - -0.3 50,205 + +1.5 50,229 - +0.7 50,301 + +1.6 50,335 + +1.4 50,335 + +1.9 50,335 + +2.6 50,366 + +2.0 50,366 + +2.1 50,446 + +2.3 50,447 - +1.3 50,739 + AZOBR_RS32845 0.18 +0.7 50,913 + AZOBR_RS32845 0.31 +2.6 50,914 - AZOBR_RS32845 0.31 +0.6 50,986 - AZOBR_RS32845 0.36 -0.1 51,044 - AZOBR_RS32845 0.41 -0.5 51,069 + AZOBR_RS32845 0.43 +2.4 51,070 - AZOBR_RS32845 0.43 +0.1 51,175 - AZOBR_RS32845 0.51 +0.3 51,243 + AZOBR_RS32845 0.56 +1.4 51,244 - AZOBR_RS32845 0.56 +0.9 51,284 + AZOBR_RS32845 0.59 +1.0 51,285 - AZOBR_RS32845 0.59 +1.3 51,420 + AZOBR_RS32845 0.69 +3.0 51,644 + AZOBR_RS32845 0.86 +1.0 51,644 + AZOBR_RS32845 0.86 +2.2 51,644 + AZOBR_RS32845 0.86 +1.3 51,786 + -0.1 51,831 + +0.6 51,832 - -0.1 51,999 + AZOBR_RS32850 0.37 +0.8 52,314 + -1.6 52,314 + +0.9 52,784 + AZOBR_RS32855 0.82 +0.0 52,784 + AZOBR_RS32855 0.82 +1.0 52,785 - AZOBR_RS32855 0.82 +0.2 52,785 - AZOBR_RS32855 0.82 +0.2 52,803 + +1.0 52,803 + AZOBR_RS32855 0.85 +1.1 52,803 + AZOBR_RS32855 0.85 +0.0 52,803 + AZOBR_RS32855 0.85 -0.8 52,804 - AZOBR_RS32855 0.85 +0.3
Or see this region's nucleotide sequence