Experiment: MoYLS4 with Lomefloxacin 0.00156 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2633 and DvMF_2634 are separated by 680 nucleotides DvMF_2634 and DvMF_2635 are separated by 270 nucleotides DvMF_2635 and DvMF_2636 are separated by 206 nucleotides
DvMF_2633: DvMF_2633 - Aldehyde Dehydrogenase (RefSeq), at 3,327,308 to 3,328,690
_2633
DvMF_2634: DvMF_2634 - FAD dependent oxidoreductase (RefSeq), at 3,329,371 to 3,330,762
_2634
DvMF_2635: DvMF_2635 - hypothetical protein (RefSeq), at 3,331,033 to 3,331,260
_2635
DvMF_2636: DvMF_2636 - hypothetical protein (RefSeq), at 3,331,467 to 3,332,336
_2636
Position (kb)
3329
3330
3331 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3328.468 kb on - strand, within DvMF_2633 at 3328.470 kb on + strand, within DvMF_2633 at 3328.632 kb on + strand at 3328.634 kb on + strand at 3328.686 kb on + strand at 3328.784 kb on + strand at 3328.905 kb on + strand at 3328.927 kb on - strand at 3329.022 kb on + strand at 3329.037 kb on + strand at 3329.089 kb on + strand at 3329.095 kb on + strand at 3329.287 kb on - strand at 3329.389 kb on - strand at 3329.638 kb on - strand, within DvMF_2634 at 3329.654 kb on - strand, within DvMF_2634 at 3329.748 kb on + strand, within DvMF_2634 at 3329.902 kb on - strand, within DvMF_2634 at 3330.059 kb on + strand, within DvMF_2634 at 3330.059 kb on + strand, within DvMF_2634 at 3330.059 kb on + strand, within DvMF_2634 at 3330.059 kb on + strand, within DvMF_2634 at 3330.059 kb on + strand, within DvMF_2634 at 3330.059 kb on + strand, within DvMF_2634 at 3330.067 kb on - strand, within DvMF_2634 at 3330.090 kb on - strand, within DvMF_2634 at 3330.176 kb on - strand, within DvMF_2634 at 3330.291 kb on + strand, within DvMF_2634 at 3330.449 kb on - strand, within DvMF_2634 at 3330.452 kb on + strand, within DvMF_2634 at 3330.471 kb on - strand, within DvMF_2634 at 3330.811 kb on + strand at 3330.956 kb on + strand at 3331.032 kb on - strand at 3331.070 kb on - strand, within DvMF_2635 at 3331.351 kb on - strand at 3331.759 kb on - strand, within DvMF_2636
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Lomefloxacin 0.00156 mM remove 3,328,468 - DvMF_2633 0.84 -1.2 3,328,470 + DvMF_2633 0.84 -3.9 3,328,632 + -1.2 3,328,634 + -1.4 3,328,686 + -0.8 3,328,784 + -4.8 3,328,905 + -2.4 3,328,927 - -2.0 3,329,022 + -2.3 3,329,037 + -2.5 3,329,089 + -1.4 3,329,095 + -3.9 3,329,287 - -5.0 3,329,389 - -1.1 3,329,638 - DvMF_2634 0.19 -4.0 3,329,654 - DvMF_2634 0.20 -1.1 3,329,748 + DvMF_2634 0.27 -1.9 3,329,902 - DvMF_2634 0.38 -0.5 3,330,059 + DvMF_2634 0.49 -0.8 3,330,059 + DvMF_2634 0.49 +0.7 3,330,059 + DvMF_2634 0.49 -2.3 3,330,059 + DvMF_2634 0.49 -2.3 3,330,059 + DvMF_2634 0.49 +1.1 3,330,059 + DvMF_2634 0.49 -2.0 3,330,067 - DvMF_2634 0.50 -3.8 3,330,090 - DvMF_2634 0.52 -0.6 3,330,176 - DvMF_2634 0.58 -2.9 3,330,291 + DvMF_2634 0.66 -1.9 3,330,449 - DvMF_2634 0.77 -2.0 3,330,452 + DvMF_2634 0.78 +0.8 3,330,471 - DvMF_2634 0.79 -2.8 3,330,811 + -1.6 3,330,956 + -0.8 3,331,032 - +0.9 3,331,070 - DvMF_2635 0.16 -2.0 3,331,351 - -2.2 3,331,759 - DvMF_2636 0.34 -1.8
Or see this region's nucleotide sequence