Experiment: MoYLS4 with Lomefloxacin 0.00156 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2111 and DvMF_2112 are separated by 433 nucleotides DvMF_2112 and DvMF_2113 are separated by 389 nucleotides DvMF_2113 and DvMF_2114 are separated by 251 nucleotides
DvMF_2111: DvMF_2111 - hypothetical protein (RefSeq), at 2,631,458 to 2,631,952
_2111
DvMF_2112: DvMF_2112 - ADP-ribosylation/Crystallin J1 (RefSeq), at 2,632,386 to 2,633,303
_2112
DvMF_2113: DvMF_2113 - hypothetical protein (RefSeq), at 2,633,693 to 2,633,878
_2113
DvMF_2114: DvMF_2114 - putative rRNA methylase (RefSeq), at 2,634,130 to 2,634,861
_2114
Position (kb)
2632
2633
2634 Strain fitness (log2 ratio)
-2
-1
0
1 at 2631.460 kb on - strand at 2631.610 kb on - strand, within DvMF_2111 at 2631.729 kb on + strand, within DvMF_2111 at 2631.812 kb on - strand, within DvMF_2111 at 2631.888 kb on - strand, within DvMF_2111 at 2631.888 kb on - strand, within DvMF_2111 at 2631.900 kb on + strand, within DvMF_2111 at 2631.956 kb on - strand at 2632.380 kb on - strand at 2632.691 kb on - strand, within DvMF_2112 at 2632.706 kb on + strand, within DvMF_2112 at 2632.751 kb on + strand, within DvMF_2112 at 2632.754 kb on - strand, within DvMF_2112 at 2632.852 kb on + strand, within DvMF_2112 at 2632.961 kb on - strand, within DvMF_2112 at 2633.033 kb on + strand, within DvMF_2112 at 2633.069 kb on + strand, within DvMF_2112 at 2633.085 kb on + strand, within DvMF_2112 at 2633.298 kb on - strand at 2633.385 kb on + strand at 2633.406 kb on + strand at 2633.709 kb on + strand at 2633.715 kb on - strand, within DvMF_2113 at 2633.798 kb on - strand, within DvMF_2113 at 2634.262 kb on + strand, within DvMF_2114 at 2634.267 kb on + strand, within DvMF_2114 at 2634.279 kb on + strand, within DvMF_2114 at 2634.281 kb on + strand, within DvMF_2114
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Lomefloxacin 0.00156 mM remove 2,631,460 - -2.4 2,631,610 - DvMF_2111 0.31 -1.0 2,631,729 + DvMF_2111 0.55 +1.7 2,631,812 - DvMF_2111 0.72 -0.9 2,631,888 - DvMF_2111 0.87 +0.2 2,631,888 - DvMF_2111 0.87 -0.5 2,631,900 + DvMF_2111 0.89 +0.2 2,631,956 - -0.8 2,632,380 - -1.8 2,632,691 - DvMF_2112 0.33 -0.5 2,632,706 + DvMF_2112 0.35 -0.7 2,632,751 + DvMF_2112 0.40 -0.7 2,632,754 - DvMF_2112 0.40 -0.7 2,632,852 + DvMF_2112 0.51 -0.3 2,632,961 - DvMF_2112 0.63 -1.0 2,633,033 + DvMF_2112 0.70 -1.5 2,633,069 + DvMF_2112 0.74 -0.6 2,633,085 + DvMF_2112 0.76 -0.2 2,633,298 - -0.3 2,633,385 + -1.7 2,633,406 + -0.4 2,633,709 + -0.0 2,633,715 - DvMF_2113 0.12 -1.4 2,633,798 - DvMF_2113 0.56 -0.3 2,634,262 + DvMF_2114 0.18 +0.5 2,634,267 + DvMF_2114 0.19 -0.8 2,634,279 + DvMF_2114 0.20 -1.0 2,634,281 + DvMF_2114 0.21 -0.3
Or see this region's nucleotide sequence