Experiment: MoYLS4 with Lomefloxacin 0.00156 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2051 and DvMF_2052 are separated by 232 nucleotides DvMF_2052 and DvMF_2053 are separated by 209 nucleotides
DvMF_2051: DvMF_2051 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (RefSeq), at 2,543,183 to 2,544,430
_2051
DvMF_2052: DvMF_2052 - hypothetical protein (RefSeq), at 2,544,663 to 2,545,223
_2052
DvMF_2053: DvMF_2053 - S-adenosylmethionine/tRNA-ribosyltransferase- isomerase (RefSeq), at 2,545,433 to 2,546,686
_2053
Position (kb)
2544
2545
2546 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2544.459 kb on - strand at 2544.490 kb on - strand at 2544.492 kb on + strand at 2544.500 kb on - strand at 2544.519 kb on + strand at 2544.572 kb on - strand at 2544.683 kb on - strand at 2544.771 kb on - strand, within DvMF_2052 at 2544.798 kb on - strand, within DvMF_2052 at 2544.826 kb on - strand, within DvMF_2052 at 2544.829 kb on + strand, within DvMF_2052 at 2544.837 kb on - strand, within DvMF_2052 at 2544.837 kb on - strand, within DvMF_2052 at 2544.931 kb on - strand, within DvMF_2052 at 2544.933 kb on - strand, within DvMF_2052 at 2544.966 kb on - strand, within DvMF_2052 at 2545.039 kb on + strand, within DvMF_2052 at 2545.047 kb on - strand, within DvMF_2052 at 2545.058 kb on - strand, within DvMF_2052 at 2545.233 kb on - strand at 2545.233 kb on - strand at 2545.233 kb on - strand at 2545.419 kb on - strand at 2545.427 kb on + strand at 2545.427 kb on + strand at 2545.613 kb on + strand, within DvMF_2053 at 2545.671 kb on - strand, within DvMF_2053 at 2545.730 kb on + strand, within DvMF_2053 at 2545.804 kb on - strand, within DvMF_2053 at 2545.897 kb on - strand, within DvMF_2053 at 2546.068 kb on + strand, within DvMF_2053 at 2546.136 kb on - strand, within DvMF_2053 at 2546.151 kb on - strand, within DvMF_2053 at 2546.158 kb on + strand, within DvMF_2053 at 2546.161 kb on - strand, within DvMF_2053 at 2546.196 kb on + strand, within DvMF_2053
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Lomefloxacin 0.00156 mM remove 2,544,459 - -0.0 2,544,490 - -2.3 2,544,492 + -0.3 2,544,500 - -0.2 2,544,519 + -0.6 2,544,572 - -0.3 2,544,683 - +0.1 2,544,771 - DvMF_2052 0.19 -0.4 2,544,798 - DvMF_2052 0.24 -0.8 2,544,826 - DvMF_2052 0.29 +0.2 2,544,829 + DvMF_2052 0.30 -1.4 2,544,837 - DvMF_2052 0.31 -1.4 2,544,837 - DvMF_2052 0.31 -0.7 2,544,931 - DvMF_2052 0.48 -0.4 2,544,933 - DvMF_2052 0.48 -0.8 2,544,966 - DvMF_2052 0.54 -0.5 2,545,039 + DvMF_2052 0.67 -0.5 2,545,047 - DvMF_2052 0.68 -0.8 2,545,058 - DvMF_2052 0.70 -0.3 2,545,233 - -0.7 2,545,233 - -2.7 2,545,233 - -0.7 2,545,419 - -0.6 2,545,427 + -0.5 2,545,427 + -0.8 2,545,613 + DvMF_2053 0.14 -2.9 2,545,671 - DvMF_2053 0.19 -0.3 2,545,730 + DvMF_2053 0.24 -0.5 2,545,804 - DvMF_2053 0.30 -0.3 2,545,897 - DvMF_2053 0.37 +0.2 2,546,068 + DvMF_2053 0.51 -0.8 2,546,136 - DvMF_2053 0.56 -0.0 2,546,151 - DvMF_2053 0.57 -0.6 2,546,158 + DvMF_2053 0.58 -1.9 2,546,161 - DvMF_2053 0.58 -0.4 2,546,196 + DvMF_2053 0.61 -1.2
Or see this region's nucleotide sequence