Experiment: MoYLS4 with Lomefloxacin 0.00156 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1264 and DvMF_1265 overlap by 4 nucleotides DvMF_1265 and DvMF_1266 are separated by 2 nucleotides DvMF_1266 and DvMF_1267 are separated by 2 nucleotides DvMF_1267 and DvMF_1268 overlap by 1 nucleotides
DvMF_1264: DvMF_1264 - Transposase-like Mu (RefSeq), at 1,560,629 to 1,562,815
_1264
DvMF_1265: DvMF_1265 - bacteriophage DNA transposition B protein, putative (RefSeq), at 1,562,812 to 1,563,513
_1265
DvMF_1266: DvMF_1266 - hypothetical protein (RefSeq), at 1,563,516 to 1,564,160
_1266
DvMF_1267: DvMF_1267 - hypothetical protein (RefSeq), at 1,564,163 to 1,564,372
_1267
DvMF_1268: DvMF_1268 - Mu Gam family protein (RefSeq), at 1,564,372 to 1,564,881
_1268
Position (kb)
1562
1563
1564 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1561.882 kb on - strand, within DvMF_1264 at 1561.911 kb on - strand, within DvMF_1264 at 1561.982 kb on - strand, within DvMF_1264 at 1562.226 kb on + strand, within DvMF_1264 at 1562.233 kb on - strand, within DvMF_1264 at 1562.238 kb on - strand, within DvMF_1264 at 1562.302 kb on - strand, within DvMF_1264 at 1562.313 kb on - strand, within DvMF_1264 at 1562.517 kb on + strand, within DvMF_1264 at 1562.622 kb on - strand at 1562.666 kb on + strand at 1562.666 kb on + strand at 1562.744 kb on + strand at 1562.871 kb on - strand at 1563.010 kb on - strand, within DvMF_1265 at 1563.313 kb on - strand, within DvMF_1265 at 1563.320 kb on - strand, within DvMF_1265 at 1563.488 kb on - strand at 1563.610 kb on + strand, within DvMF_1266 at 1563.618 kb on - strand, within DvMF_1266 at 1563.716 kb on + strand, within DvMF_1266 at 1563.724 kb on + strand, within DvMF_1266 at 1563.724 kb on + strand, within DvMF_1266 at 1563.724 kb on + strand, within DvMF_1266 at 1563.752 kb on - strand, within DvMF_1266 at 1563.907 kb on + strand, within DvMF_1266 at 1563.957 kb on - strand, within DvMF_1266 at 1564.077 kb on - strand, within DvMF_1266 at 1564.128 kb on - strand at 1564.185 kb on - strand, within DvMF_1267 at 1564.380 kb on + strand at 1564.388 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Lomefloxacin 0.00156 mM remove 1,561,882 - DvMF_1264 0.57 -1.4 1,561,911 - DvMF_1264 0.59 -0.8 1,561,982 - DvMF_1264 0.62 -0.6 1,562,226 + DvMF_1264 0.73 -1.6 1,562,233 - DvMF_1264 0.73 -1.6 1,562,238 - DvMF_1264 0.74 -1.3 1,562,302 - DvMF_1264 0.76 -0.6 1,562,313 - DvMF_1264 0.77 -2.2 1,562,517 + DvMF_1264 0.86 -2.0 1,562,622 - -0.8 1,562,666 + +1.5 1,562,666 + -0.0 1,562,744 + -0.4 1,562,871 - -1.0 1,563,010 - DvMF_1265 0.28 -2.0 1,563,313 - DvMF_1265 0.71 -0.3 1,563,320 - DvMF_1265 0.72 -2.3 1,563,488 - -1.0 1,563,610 + DvMF_1266 0.15 -0.7 1,563,618 - DvMF_1266 0.16 -2.1 1,563,716 + DvMF_1266 0.31 -0.8 1,563,724 + DvMF_1266 0.32 -0.4 1,563,724 + DvMF_1266 0.32 +0.1 1,563,724 + DvMF_1266 0.32 -0.7 1,563,752 - DvMF_1266 0.37 -1.5 1,563,907 + DvMF_1266 0.61 -0.2 1,563,957 - DvMF_1266 0.68 +0.1 1,564,077 - DvMF_1266 0.87 +0.8 1,564,128 - -0.1 1,564,185 - DvMF_1267 0.10 +1.3 1,564,380 + +3.2 1,564,388 - +0.7
Or see this region's nucleotide sequence