Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0848

Experiment: MoYLS4 with Lomefloxacin 0.00156 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0846 and DvMF_0847 are separated by 438 nucleotidesDvMF_0847 and DvMF_0848 are separated by 136 nucleotidesDvMF_0848 and DvMF_0849 are separated by 517 nucleotides DvMF_0846: DvMF_0846 - hypothetical protein (RefSeq), at 1,021,732 to 1,024,080 _0846 DvMF_0847: DvMF_0847 - hypothetical protein (RefSeq), at 1,024,519 to 1,024,737 _0847 DvMF_0848: DvMF_0848 - glucose inhibited division protein (RefSeq), at 1,024,874 to 1,025,650 _0848 DvMF_0849: DvMF_0849 - Acyl transferase (RefSeq), at 1,026,168 to 1,027,130 _0849 Position (kb) 1024 1025 1026Strain fitness (log2 ratio) -2 -1 0 1at 1024.200 kb on + strandat 1024.250 kb on - strandat 1024.302 kb on + strandat 1024.312 kb on + strandat 1024.646 kb on - strand, within DvMF_0847at 1025.018 kb on + strand, within DvMF_0848at 1025.058 kb on + strand, within DvMF_0848at 1025.158 kb on + strand, within DvMF_0848at 1025.260 kb on - strand, within DvMF_0848at 1025.301 kb on - strand, within DvMF_0848at 1025.653 kb on - strandat 1025.853 kb on + strandat 1025.903 kb on - strandat 1025.931 kb on - strandat 1026.114 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Lomefloxacin 0.00156 mM
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1,024,200 + -1.2
1,024,250 - -0.9
1,024,302 + -1.9
1,024,312 + -0.9
1,024,646 - DvMF_0847 0.58 -2.1
1,025,018 + DvMF_0848 0.19 -0.5
1,025,058 + DvMF_0848 0.24 -2.2
1,025,158 + DvMF_0848 0.37 -2.2
1,025,260 - DvMF_0848 0.50 -1.6
1,025,301 - DvMF_0848 0.55 -0.6
1,025,653 - -1.4
1,025,853 + -0.7
1,025,903 - -1.9
1,025,931 - -2.1
1,026,114 - -1.5

Or see this region's nucleotide sequence