Experiment: MoYLS4 with Lomefloxacin 0.00156 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0722 and DvMF_0723 are separated by 2 nucleotides DvMF_0723 and DvMF_0724 overlap by 1 nucleotides DvMF_0724 and DvMF_0725 overlap by 4 nucleotides DvMF_0725 and DvMF_0726 are separated by 13 nucleotides
DvMF_0722: DvMF_0722 - phage-related membrane protein (RefSeq), at 872,838 to 873,209
_0722
DvMF_0723: DvMF_0723 - Lytic transglycosylase catalytic (RefSeq), at 873,212 to 874,000
_0723
DvMF_0724: DvMF_0724 - hypothetical protein (RefSeq), at 874,000 to 874,695
_0724
DvMF_0725: DvMF_0725 - hypothetical protein (RefSeq), at 874,692 to 874,958
_0725
DvMF_0726: DvMF_0726 - hypothetical protein (RefSeq), at 874,972 to 875,187
_0726
Position (kb) 873
874
875 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 872.734 kb on + strand at 873.242 kb on - strand at 873.362 kb on - strand, within DvMF_0723 at 873.473 kb on + strand, within DvMF_0723 at 873.476 kb on - strand, within DvMF_0723 at 873.478 kb on + strand, within DvMF_0723 at 873.594 kb on + strand, within DvMF_0723 at 873.667 kb on + strand, within DvMF_0723 at 873.714 kb on + strand, within DvMF_0723 at 873.807 kb on + strand, within DvMF_0723 at 874.183 kb on + strand, within DvMF_0724 at 874.333 kb on + strand, within DvMF_0724 at 874.391 kb on - strand, within DvMF_0724 at 874.640 kb on + strand at 874.659 kb on + strand at 874.738 kb on - strand, within DvMF_0725 at 874.761 kb on + strand, within DvMF_0725
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Lomefloxacin 0.00156 mM remove 872,734 + +3.6 873,242 - +4.1 873,362 - DvMF_0723 0.19 +4.3 873,473 + DvMF_0723 0.33 +3.7 873,476 - DvMF_0723 0.33 +4.4 873,478 + DvMF_0723 0.34 +3.6 873,594 + DvMF_0723 0.48 +2.2 873,667 + DvMF_0723 0.58 +4.2 873,714 + DvMF_0723 0.64 +3.6 873,807 + DvMF_0723 0.75 +3.6 874,183 + DvMF_0724 0.26 +3.0 874,333 + DvMF_0724 0.48 +3.9 874,391 - DvMF_0724 0.56 +3.0 874,640 + +2.9 874,659 + +3.0 874,738 - DvMF_0725 0.17 +1.2 874,761 + DvMF_0725 0.26 +2.1
Or see this region's nucleotide sequence