Experiment: MoYLS4 with Lomefloxacin 0.00156 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0668 and DvMF_0669 are separated by 2 nucleotides DvMF_0669 and DvMF_0670 are separated by 74 nucleotides
DvMF_0668: DvMF_0668 - ATP-grasp protein-like protein (RefSeq), at 806,163 to 807,344
_0668
DvMF_0669: DvMF_0669 - hypothetical protein (RefSeq), at 807,347 to 809,689
_0669
DvMF_0670: DvMF_0670 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 809,764 to 811,125
_0670
Position (kb) 807
808
809
810 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 806.592 kb on + strand, within DvMF_0668 at 807.015 kb on + strand, within DvMF_0668 at 807.121 kb on + strand, within DvMF_0668 at 807.235 kb on + strand at 807.500 kb on + strand at 807.546 kb on - strand at 807.823 kb on + strand, within DvMF_0669 at 807.842 kb on + strand, within DvMF_0669 at 807.912 kb on + strand, within DvMF_0669 at 808.048 kb on - strand, within DvMF_0669 at 808.201 kb on - strand, within DvMF_0669 at 808.280 kb on + strand, within DvMF_0669 at 808.280 kb on + strand, within DvMF_0669 at 808.354 kb on - strand, within DvMF_0669 at 808.431 kb on - strand, within DvMF_0669 at 808.452 kb on - strand, within DvMF_0669 at 808.452 kb on - strand, within DvMF_0669 at 808.516 kb on + strand, within DvMF_0669 at 808.528 kb on - strand, within DvMF_0669 at 808.609 kb on + strand, within DvMF_0669 at 808.724 kb on + strand, within DvMF_0669 at 808.770 kb on + strand, within DvMF_0669 at 808.775 kb on + strand, within DvMF_0669 at 808.783 kb on - strand, within DvMF_0669 at 808.853 kb on - strand, within DvMF_0669 at 808.918 kb on - strand, within DvMF_0669 at 809.360 kb on + strand, within DvMF_0669 at 809.777 kb on - strand at 809.989 kb on + strand, within DvMF_0670 at 810.371 kb on + strand, within DvMF_0670 at 810.508 kb on + strand, within DvMF_0670 at 810.549 kb on - strand, within DvMF_0670 at 810.558 kb on + strand, within DvMF_0670 at 810.566 kb on - strand, within DvMF_0670
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Lomefloxacin 0.00156 mM remove 806,592 + DvMF_0668 0.36 +0.8 807,015 + DvMF_0668 0.72 -2.2 807,121 + DvMF_0668 0.81 -3.6 807,235 + -1.2 807,500 + -1.1 807,546 - -4.1 807,823 + DvMF_0669 0.20 -1.4 807,842 + DvMF_0669 0.21 -1.4 807,912 + DvMF_0669 0.24 -0.4 808,048 - DvMF_0669 0.30 -1.6 808,201 - DvMF_0669 0.36 -2.5 808,280 + DvMF_0669 0.40 -0.7 808,280 + DvMF_0669 0.40 -0.7 808,354 - DvMF_0669 0.43 -0.6 808,431 - DvMF_0669 0.46 -0.6 808,452 - DvMF_0669 0.47 +1.5 808,452 - DvMF_0669 0.47 -1.0 808,516 + DvMF_0669 0.50 +0.2 808,528 - DvMF_0669 0.50 -1.2 808,609 + DvMF_0669 0.54 -1.6 808,724 + DvMF_0669 0.59 -3.0 808,770 + DvMF_0669 0.61 -0.7 808,775 + DvMF_0669 0.61 +0.7 808,783 - DvMF_0669 0.61 -2.4 808,853 - DvMF_0669 0.64 -0.2 808,918 - DvMF_0669 0.67 -1.5 809,360 + DvMF_0669 0.86 +0.1 809,777 - -2.7 809,989 + DvMF_0670 0.17 -4.0 810,371 + DvMF_0670 0.45 -0.4 810,508 + DvMF_0670 0.55 -0.9 810,549 - DvMF_0670 0.58 -1.1 810,558 + DvMF_0670 0.58 -5.2 810,566 - DvMF_0670 0.59 +0.0
Or see this region's nucleotide sequence