Experiment: MoYLS4 with Lomefloxacin 0.00156 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0467 and DvMF_0468 are separated by 577 nucleotides DvMF_0468 and DvMF_0469 are separated by 194 nucleotides
DvMF_0467: DvMF_0467 - CheA signal transduction histidine kinase (RefSeq), at 545,226 to 547,400
_0467
DvMF_0468: DvMF_0468 - response regulator receiver protein (RefSeq), at 547,978 to 548,340
_0468
DvMF_0469: DvMF_0469 - methyl-accepting chemotaxis sensory transducer (RefSeq), at 548,535 to 550,361
_0469
Position (kb) 547
548
549 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 547.135 kb on - strand, within DvMF_0467 at 547.162 kb on + strand, within DvMF_0467 at 547.255 kb on - strand at 547.497 kb on - strand at 547.655 kb on - strand at 547.825 kb on - strand at 547.846 kb on - strand at 547.851 kb on - strand at 548.154 kb on + strand, within DvMF_0468 at 548.154 kb on + strand, within DvMF_0468 at 548.154 kb on + strand, within DvMF_0468 at 548.162 kb on - strand, within DvMF_0468 at 548.246 kb on + strand, within DvMF_0468 at 548.265 kb on - strand, within DvMF_0468 at 548.285 kb on - strand, within DvMF_0468 at 548.285 kb on - strand, within DvMF_0468 at 548.304 kb on + strand at 548.343 kb on + strand at 548.401 kb on + strand at 548.401 kb on + strand at 548.470 kb on - strand at 548.812 kb on + strand, within DvMF_0469 at 548.844 kb on + strand, within DvMF_0469 at 548.852 kb on - strand, within DvMF_0469 at 548.979 kb on - strand, within DvMF_0469
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Lomefloxacin 0.00156 mM remove 547,135 - DvMF_0467 0.88 -0.6 547,162 + DvMF_0467 0.89 -2.0 547,255 - -0.3 547,497 - -3.4 547,655 - -3.1 547,825 - -0.5 547,846 - -4.4 547,851 - -0.6 548,154 + DvMF_0468 0.48 +3.4 548,154 + DvMF_0468 0.48 +3.8 548,154 + DvMF_0468 0.48 +0.9 548,162 - DvMF_0468 0.51 +3.5 548,246 + DvMF_0468 0.74 +4.0 548,265 - DvMF_0468 0.79 +1.6 548,285 - DvMF_0468 0.85 -0.5 548,285 - DvMF_0468 0.85 +0.3 548,304 + +2.2 548,343 + -0.5 548,401 + -1.3 548,401 + -0.8 548,470 - -2.7 548,812 + DvMF_0469 0.15 -2.3 548,844 + DvMF_0469 0.17 -2.5 548,852 - DvMF_0469 0.17 -1.6 548,979 - DvMF_0469 0.24 -1.5
Or see this region's nucleotide sequence