Experiment: MoYLS4 with Lomefloxacin 0.00156 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0191 and DvMF_0192 are separated by 625 nucleotides DvMF_0192 and DvMF_0193 are separated by 208 nucleotides
DvMF_0191: DvMF_0191 - hypothetical protein (RefSeq), at 207,764 to 208,000
_0191
DvMF_0192: DvMF_0192 - ATP-dependent helicase HrpB (RefSeq), at 208,626 to 211,379
_0192
DvMF_0193: DvMF_0193 - hypothetical protein (RefSeq), at 211,588 to 212,277
_0193
Position (kb) 208
209
210
211
212 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 207.714 kb on + strand at 207.910 kb on - strand, within DvMF_0191 at 207.981 kb on + strand at 208.249 kb on + strand at 208.257 kb on - strand at 208.695 kb on + strand at 208.809 kb on - strand at 208.944 kb on + strand, within DvMF_0192 at 208.960 kb on + strand, within DvMF_0192 at 209.155 kb on - strand, within DvMF_0192 at 209.263 kb on - strand, within DvMF_0192 at 209.263 kb on - strand, within DvMF_0192 at 209.367 kb on + strand, within DvMF_0192 at 209.687 kb on - strand, within DvMF_0192 at 209.821 kb on - strand, within DvMF_0192 at 209.825 kb on - strand, within DvMF_0192 at 209.955 kb on - strand, within DvMF_0192 at 210.176 kb on + strand, within DvMF_0192 at 210.441 kb on - strand, within DvMF_0192 at 210.466 kb on - strand, within DvMF_0192 at 210.724 kb on - strand, within DvMF_0192 at 210.838 kb on - strand, within DvMF_0192 at 211.053 kb on - strand, within DvMF_0192 at 211.514 kb on + strand at 211.594 kb on + strand at 211.738 kb on - strand, within DvMF_0193 at 212.305 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Lomefloxacin 0.00156 mM remove 207,714 + -2.4 207,910 - DvMF_0191 0.62 -2.2 207,981 + -1.1 208,249 + -2.9 208,257 - -0.5 208,695 + -2.6 208,809 - -1.4 208,944 + DvMF_0192 0.12 +0.5 208,960 + DvMF_0192 0.12 +0.3 209,155 - DvMF_0192 0.19 +0.0 209,263 - DvMF_0192 0.23 +0.1 209,263 - DvMF_0192 0.23 -0.2 209,367 + DvMF_0192 0.27 -0.8 209,687 - DvMF_0192 0.39 -3.1 209,821 - DvMF_0192 0.43 +0.4 209,825 - DvMF_0192 0.44 -0.7 209,955 - DvMF_0192 0.48 -0.9 210,176 + DvMF_0192 0.56 -1.3 210,441 - DvMF_0192 0.66 +1.0 210,466 - DvMF_0192 0.67 -1.7 210,724 - DvMF_0192 0.76 -0.8 210,838 - DvMF_0192 0.80 -0.2 211,053 - DvMF_0192 0.88 -3.2 211,514 + -4.5 211,594 + -0.7 211,738 - DvMF_0193 0.22 -1.1 212,305 + -0.6
Or see this region's nucleotide sequence