Experiment: Dimethyl Sulfoxide 7.5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4632 and Pf6N2E2_4633 are separated by 590 nucleotides Pf6N2E2_4633 and Pf6N2E2_4634 overlap by 1 nucleotides Pf6N2E2_4634 and Pf6N2E2_4635 are separated by 240 nucleotides
Pf6N2E2_4632 - Amine oxidase [flavin-containing] (EC 1.4.3.4), at 5,360,953 to 5,362,716
_4632
Pf6N2E2_4633 - Cytochrome B561, at 5,363,307 to 5,363,858
_4633
Pf6N2E2_4634 - Protein yceI precursor, at 5,363,858 to 5,364,487
_4634
Pf6N2E2_4635 - ATP-dependent RNA helicase RhlE, at 5,364,728 to 5,366,596
_4635
Position (kb) 5363
5364 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5362.715 kb on - strand at 5362.750 kb on - strand at 5362.750 kb on - strand at 5362.750 kb on - strand at 5362.750 kb on - strand at 5362.750 kb on - strand at 5362.764 kb on - strand at 5362.931 kb on - strand at 5362.931 kb on - strand at 5362.962 kb on + strand at 5362.963 kb on - strand at 5362.963 kb on - strand at 5362.982 kb on + strand at 5362.983 kb on - strand at 5362.983 kb on - strand at 5362.983 kb on - strand at 5362.983 kb on - strand at 5362.984 kb on + strand at 5362.985 kb on - strand at 5362.985 kb on - strand at 5362.997 kb on + strand at 5362.998 kb on - strand at 5362.998 kb on - strand at 5363.017 kb on + strand at 5363.017 kb on + strand at 5363.017 kb on + strand at 5363.017 kb on + strand at 5363.017 kb on + strand at 5363.018 kb on - strand at 5363.018 kb on - strand at 5363.018 kb on - strand at 5363.021 kb on - strand at 5363.037 kb on + strand at 5363.038 kb on - strand at 5363.038 kb on - strand at 5363.038 kb on - strand at 5363.038 kb on - strand at 5363.038 kb on - strand at 5363.069 kb on + strand at 5363.069 kb on + strand at 5363.070 kb on - strand at 5363.072 kb on + strand at 5363.072 kb on + strand at 5363.072 kb on + strand at 5363.072 kb on + strand at 5363.072 kb on + strand at 5363.072 kb on + strand at 5363.072 kb on + strand at 5363.072 kb on + strand at 5363.072 kb on + strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.073 kb on - strand at 5363.139 kb on + strand at 5363.139 kb on + strand at 5363.140 kb on - strand at 5363.179 kb on + strand at 5363.180 kb on - strand at 5363.180 kb on - strand at 5363.180 kb on - strand at 5363.218 kb on + strand at 5363.218 kb on + strand at 5363.265 kb on + strand at 5363.265 kb on + strand at 5363.266 kb on - strand at 5363.266 kb on - strand at 5363.299 kb on + strand at 5363.299 kb on + strand at 5363.299 kb on + strand at 5363.300 kb on - strand at 5363.314 kb on + strand at 5363.314 kb on + strand at 5363.315 kb on - strand at 5363.315 kb on - strand at 5363.315 kb on - strand at 5363.349 kb on - strand at 5363.382 kb on + strand, within Pf6N2E2_4633 at 5363.382 kb on + strand, within Pf6N2E2_4633 at 5363.383 kb on - strand, within Pf6N2E2_4633 at 5363.424 kb on + strand, within Pf6N2E2_4633 at 5363.424 kb on + strand, within Pf6N2E2_4633 at 5363.425 kb on - strand, within Pf6N2E2_4633 at 5363.425 kb on - strand, within Pf6N2E2_4633 at 5363.427 kb on + strand, within Pf6N2E2_4633 at 5363.427 kb on + strand, within Pf6N2E2_4633 at 5363.427 kb on + strand, within Pf6N2E2_4633 at 5363.427 kb on + strand, within Pf6N2E2_4633 at 5363.428 kb on - strand, within Pf6N2E2_4633 at 5363.428 kb on - strand, within Pf6N2E2_4633 at 5363.550 kb on + strand, within Pf6N2E2_4633 at 5363.551 kb on - strand, within Pf6N2E2_4633 at 5363.588 kb on + strand, within Pf6N2E2_4633 at 5363.589 kb on - strand, within Pf6N2E2_4633 at 5363.589 kb on - strand, within Pf6N2E2_4633 at 5363.589 kb on - strand, within Pf6N2E2_4633 at 5363.598 kb on + strand, within Pf6N2E2_4633 at 5363.598 kb on + strand, within Pf6N2E2_4633 at 5363.599 kb on - strand, within Pf6N2E2_4633 at 5363.745 kb on + strand, within Pf6N2E2_4633 at 5363.745 kb on + strand, within Pf6N2E2_4633 at 5363.745 kb on + strand, within Pf6N2E2_4633 at 5363.745 kb on + strand, within Pf6N2E2_4633 at 5363.745 kb on + strand, within Pf6N2E2_4633 at 5363.746 kb on - strand, within Pf6N2E2_4633 at 5363.746 kb on - strand, within Pf6N2E2_4633 at 5363.765 kb on + strand, within Pf6N2E2_4633 at 5363.766 kb on - strand, within Pf6N2E2_4633 at 5363.883 kb on + strand at 5363.966 kb on + strand, within Pf6N2E2_4634 at 5363.966 kb on + strand, within Pf6N2E2_4634 at 5363.967 kb on - strand, within Pf6N2E2_4634 at 5363.967 kb on - strand, within Pf6N2E2_4634 at 5364.027 kb on - strand, within Pf6N2E2_4634 at 5364.027 kb on - strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.028 kb on + strand, within Pf6N2E2_4634 at 5364.029 kb on - strand, within Pf6N2E2_4634 at 5364.029 kb on - strand, within Pf6N2E2_4634 at 5364.029 kb on - strand, within Pf6N2E2_4634 at 5364.029 kb on - strand, within Pf6N2E2_4634 at 5364.029 kb on - strand, within Pf6N2E2_4634 at 5364.029 kb on - strand, within Pf6N2E2_4634 at 5364.029 kb on - strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.032 kb on + strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.033 kb on - strand, within Pf6N2E2_4634 at 5364.043 kb on + strand, within Pf6N2E2_4634 at 5364.044 kb on - strand, within Pf6N2E2_4634 at 5364.044 kb on - strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.117 kb on + strand, within Pf6N2E2_4634 at 5364.118 kb on - strand, within Pf6N2E2_4634 at 5364.118 kb on - strand, within Pf6N2E2_4634 at 5364.118 kb on - strand, within Pf6N2E2_4634 at 5364.118 kb on - strand, within Pf6N2E2_4634 at 5364.121 kb on + strand, within Pf6N2E2_4634 at 5364.122 kb on - strand, within Pf6N2E2_4634 at 5364.198 kb on - strand, within Pf6N2E2_4634 at 5364.242 kb on - strand, within Pf6N2E2_4634 at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.455 kb on + strand at 5364.456 kb on - strand at 5364.456 kb on - strand at 5364.456 kb on - strand at 5364.456 kb on - strand at 5364.456 kb on - strand at 5364.456 kb on - strand at 5364.456 kb on - strand at 5364.485 kb on + strand at 5364.485 kb on + strand at 5364.485 kb on + strand at 5364.624 kb on + strand at 5364.624 kb on + strand at 5364.624 kb on + strand at 5364.624 kb on + strand at 5364.624 kb on + strand at 5364.624 kb on + strand at 5364.624 kb on + strand at 5364.624 kb on + strand at 5364.624 kb on + strand at 5364.625 kb on - strand at 5364.625 kb on - strand at 5364.625 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 7.5 vol% remove 5,362,715 - -0.8 5,362,750 - +0.2 5,362,750 - +0.4 5,362,750 - +0.1 5,362,750 - -1.7 5,362,750 - +0.0 5,362,764 - -0.4 5,362,931 - +0.6 5,362,931 - +0.1 5,362,962 + +1.1 5,362,963 - -1.4 5,362,963 - -0.2 5,362,982 + -0.3 5,362,983 - +0.5 5,362,983 - +0.7 5,362,983 - +0.4 5,362,983 - +0.2 5,362,984 + +2.2 5,362,985 - -0.2 5,362,985 - +0.7 5,362,997 + +0.3 5,362,998 - +0.2 5,362,998 - -0.0 5,363,017 + -0.7 5,363,017 + -1.2 5,363,017 + +1.8 5,363,017 + -0.1 5,363,017 + -2.3 5,363,018 - -0.6 5,363,018 - +0.5 5,363,018 - -0.4 5,363,021 - +0.2 5,363,037 + -0.5 5,363,038 - +0.1 5,363,038 - -0.8 5,363,038 - -0.0 5,363,038 - +0.1 5,363,038 - +0.1 5,363,069 + +0.1 5,363,069 + +0.6 5,363,070 - +0.4 5,363,072 + +0.1 5,363,072 + -0.3 5,363,072 + +1.0 5,363,072 + +0.1 5,363,072 + -0.3 5,363,072 + -0.0 5,363,072 + +1.1 5,363,072 + +0.5 5,363,072 + +0.3 5,363,073 - +0.5 5,363,073 - -0.4 5,363,073 - +1.0 5,363,073 - -0.4 5,363,073 - -0.4 5,363,073 - -0.7 5,363,073 - +0.0 5,363,073 - +0.3 5,363,073 - -0.2 5,363,073 - +0.1 5,363,073 - -0.4 5,363,073 - +0.4 5,363,073 - +0.3 5,363,073 - +0.6 5,363,073 - +0.3 5,363,073 - +2.2 5,363,139 + -0.4 5,363,139 + +0.3 5,363,140 - +0.9 5,363,179 + -0.4 5,363,180 - -0.3 5,363,180 - -0.0 5,363,180 - +0.3 5,363,218 + -1.5 5,363,218 + -0.1 5,363,265 + -0.3 5,363,265 + -0.6 5,363,266 - +0.4 5,363,266 - +0.8 5,363,299 + -0.2 5,363,299 + +0.5 5,363,299 + +0.1 5,363,300 - +0.4 5,363,314 + +0.5 5,363,314 + +0.8 5,363,315 - -0.4 5,363,315 - +0.1 5,363,315 - +0.5 5,363,349 - -0.1 5,363,382 + Pf6N2E2_4633 0.14 +0.6 5,363,382 + Pf6N2E2_4633 0.14 +0.2 5,363,383 - Pf6N2E2_4633 0.14 +0.3 5,363,424 + Pf6N2E2_4633 0.21 -0.4 5,363,424 + Pf6N2E2_4633 0.21 -0.0 5,363,425 - Pf6N2E2_4633 0.21 -0.0 5,363,425 - Pf6N2E2_4633 0.21 +0.2 5,363,427 + Pf6N2E2_4633 0.22 -0.1 5,363,427 + Pf6N2E2_4633 0.22 +0.1 5,363,427 + Pf6N2E2_4633 0.22 +0.1 5,363,427 + Pf6N2E2_4633 0.22 +0.1 5,363,428 - Pf6N2E2_4633 0.22 -0.1 5,363,428 - Pf6N2E2_4633 0.22 -1.7 5,363,550 + Pf6N2E2_4633 0.44 +0.3 5,363,551 - Pf6N2E2_4633 0.44 +0.0 5,363,588 + Pf6N2E2_4633 0.51 -0.2 5,363,589 - Pf6N2E2_4633 0.51 -0.0 5,363,589 - Pf6N2E2_4633 0.51 +0.2 5,363,589 - Pf6N2E2_4633 0.51 -1.5 5,363,598 + Pf6N2E2_4633 0.53 -0.3 5,363,598 + Pf6N2E2_4633 0.53 -0.2 5,363,599 - Pf6N2E2_4633 0.53 -0.0 5,363,745 + Pf6N2E2_4633 0.79 +0.3 5,363,745 + Pf6N2E2_4633 0.79 +0.5 5,363,745 + Pf6N2E2_4633 0.79 -0.0 5,363,745 + Pf6N2E2_4633 0.79 -1.0 5,363,745 + Pf6N2E2_4633 0.79 -0.2 5,363,746 - Pf6N2E2_4633 0.80 +0.0 5,363,746 - Pf6N2E2_4633 0.80 +0.2 5,363,765 + Pf6N2E2_4633 0.83 -0.1 5,363,766 - Pf6N2E2_4633 0.83 -0.1 5,363,883 + +0.5 5,363,966 + Pf6N2E2_4634 0.17 -0.9 5,363,966 + Pf6N2E2_4634 0.17 +0.6 5,363,967 - Pf6N2E2_4634 0.17 -0.0 5,363,967 - Pf6N2E2_4634 0.17 +0.1 5,364,027 - Pf6N2E2_4634 0.27 +0.2 5,364,027 - Pf6N2E2_4634 0.27 +0.4 5,364,028 + Pf6N2E2_4634 0.27 -0.2 5,364,028 + Pf6N2E2_4634 0.27 -0.2 5,364,028 + Pf6N2E2_4634 0.27 +0.8 5,364,028 + Pf6N2E2_4634 0.27 +0.4 5,364,028 + Pf6N2E2_4634 0.27 +0.3 5,364,028 + Pf6N2E2_4634 0.27 -1.2 5,364,028 + Pf6N2E2_4634 0.27 +0.7 5,364,028 + Pf6N2E2_4634 0.27 +1.5 5,364,028 + Pf6N2E2_4634 0.27 -1.2 5,364,028 + Pf6N2E2_4634 0.27 +0.2 5,364,028 + Pf6N2E2_4634 0.27 +0.4 5,364,028 + Pf6N2E2_4634 0.27 +0.0 5,364,029 - Pf6N2E2_4634 0.27 -0.4 5,364,029 - Pf6N2E2_4634 0.27 -1.8 5,364,029 - Pf6N2E2_4634 0.27 +0.4 5,364,029 - Pf6N2E2_4634 0.27 +2.2 5,364,029 - Pf6N2E2_4634 0.27 +0.1 5,364,029 - Pf6N2E2_4634 0.27 -0.1 5,364,029 - Pf6N2E2_4634 0.27 +0.6 5,364,032 + Pf6N2E2_4634 0.28 +0.0 5,364,032 + Pf6N2E2_4634 0.28 +0.5 5,364,032 + Pf6N2E2_4634 0.28 +0.6 5,364,032 + Pf6N2E2_4634 0.28 +0.5 5,364,032 + Pf6N2E2_4634 0.28 +0.3 5,364,032 + Pf6N2E2_4634 0.28 +0.1 5,364,032 + Pf6N2E2_4634 0.28 +0.1 5,364,032 + Pf6N2E2_4634 0.28 +0.4 5,364,032 + Pf6N2E2_4634 0.28 +0.2 5,364,032 + Pf6N2E2_4634 0.28 +0.6 5,364,032 + Pf6N2E2_4634 0.28 -0.0 5,364,032 + Pf6N2E2_4634 0.28 -0.2 5,364,032 + Pf6N2E2_4634 0.28 +0.2 5,364,032 + Pf6N2E2_4634 0.28 -0.2 5,364,033 - Pf6N2E2_4634 0.28 +0.9 5,364,033 - Pf6N2E2_4634 0.28 +0.4 5,364,033 - Pf6N2E2_4634 0.28 +0.2 5,364,033 - Pf6N2E2_4634 0.28 -0.1 5,364,033 - Pf6N2E2_4634 0.28 -0.4 5,364,033 - Pf6N2E2_4634 0.28 +0.8 5,364,033 - Pf6N2E2_4634 0.28 +0.4 5,364,033 - Pf6N2E2_4634 0.28 +0.8 5,364,033 - Pf6N2E2_4634 0.28 -1.0 5,364,033 - Pf6N2E2_4634 0.28 -0.4 5,364,033 - Pf6N2E2_4634 0.28 +1.2 5,364,043 + Pf6N2E2_4634 0.29 +0.2 5,364,044 - Pf6N2E2_4634 0.30 +0.4 5,364,044 - Pf6N2E2_4634 0.30 +0.5 5,364,117 + Pf6N2E2_4634 0.41 -0.3 5,364,117 + Pf6N2E2_4634 0.41 +0.5 5,364,117 + Pf6N2E2_4634 0.41 +0.0 5,364,117 + Pf6N2E2_4634 0.41 -0.0 5,364,117 + Pf6N2E2_4634 0.41 +0.0 5,364,117 + Pf6N2E2_4634 0.41 -0.0 5,364,117 + +0.4 5,364,117 + Pf6N2E2_4634 0.41 +0.4 5,364,117 + Pf6N2E2_4634 0.41 +0.6 5,364,117 + Pf6N2E2_4634 0.41 -0.3 5,364,117 + Pf6N2E2_4634 0.41 +0.1 5,364,117 + Pf6N2E2_4634 0.41 +0.0 5,364,118 - Pf6N2E2_4634 0.41 -0.7 5,364,118 - Pf6N2E2_4634 0.41 +1.1 5,364,118 - Pf6N2E2_4634 0.41 -0.9 5,364,118 - Pf6N2E2_4634 0.41 +0.9 5,364,121 + Pf6N2E2_4634 0.42 -0.2 5,364,122 - Pf6N2E2_4634 0.42 -0.6 5,364,198 - Pf6N2E2_4634 0.54 +0.7 5,364,242 - Pf6N2E2_4634 0.61 +0.0 5,364,455 + -0.0 5,364,455 + +0.9 5,364,455 + -1.2 5,364,455 + -0.1 5,364,455 + +0.2 5,364,455 + -0.3 5,364,455 + -0.3 5,364,455 + +0.3 5,364,455 + +0.3 5,364,455 + -0.7 5,364,455 + +0.6 5,364,455 + -0.6 5,364,455 + -0.4 5,364,456 - -0.3 5,364,456 - +2.6 5,364,456 - -1.1 5,364,456 - +0.8 5,364,456 - +0.2 5,364,456 - +1.0 5,364,456 - -0.7 5,364,485 + +0.2 5,364,485 + +1.3 5,364,485 + +0.3 5,364,624 + -0.4 5,364,624 + -0.9 5,364,624 + -0.8 5,364,624 + +0.5 5,364,624 + +0.4 5,364,624 + -0.1 5,364,624 + -0.3 5,364,624 + -0.1 5,364,624 + +0.2 5,364,625 - +1.6 5,364,625 - +0.9 5,364,625 - -0.1
Or see this region's nucleotide sequence