Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4566

Experiment: Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 7.5 vol%
5,296,574	+		Pf6N2E2_4565	0.39	-0.4
5,296,575	-		Pf6N2E2_4565	0.39	-1.2
5,296,653	+		Pf6N2E2_4565	0.46	-0.1
5,296,653	+		Pf6N2E2_4565	0.46	+0.3
5,296,653	+		Pf6N2E2_4565	0.46	-0.3
5,296,653	+		Pf6N2E2_4565	0.46	+0.1
5,296,653	+		Pf6N2E2_4565	0.46	+1.1
5,296,654	-		Pf6N2E2_4565	0.46	+0.4
5,296,654	-		Pf6N2E2_4565	0.46	-0.6
5,296,654	-		Pf6N2E2_4565	0.46	+0.2
5,296,654	-		Pf6N2E2_4565	0.46	+0.9
5,296,654	-		Pf6N2E2_4565	0.46	-0.6
5,296,654	-		Pf6N2E2_4565	0.46	-0.6
5,296,736	-		Pf6N2E2_4565	0.53	-1.7
5,296,745	+		Pf6N2E2_4565	0.53	+0.5
5,296,886	+		Pf6N2E2_4565	0.65	+0.7
5,296,886	+		Pf6N2E2_4565	0.65	+0.4
5,296,887	-		Pf6N2E2_4565	0.65	-0.3
5,296,887	-		Pf6N2E2_4565	0.65	+0.7
5,296,888	+		Pf6N2E2_4565	0.65	+0.7
5,296,888	+		Pf6N2E2_4565	0.65	-0.1
5,296,888	+		Pf6N2E2_4565	0.65	+0.6
5,296,888	+		Pf6N2E2_4565	0.65	-0.3
5,296,888	+		Pf6N2E2_4565	0.65	+0.2
5,296,888	+		Pf6N2E2_4565	0.65	+0.1
5,296,888	+		Pf6N2E2_4565	0.65	+0.2
5,296,889	-		Pf6N2E2_4565	0.65	+0.2
5,296,889	-		Pf6N2E2_4565	0.65	-0.8
5,296,889	-		Pf6N2E2_4565	0.65	+0.7
5,296,928	+		Pf6N2E2_4565	0.69	+0.1
5,296,928	+		Pf6N2E2_4565	0.69	-0.7
5,296,929	-		Pf6N2E2_4565	0.69	+0.6
5,296,929	-		Pf6N2E2_4565	0.69	+0.4
5,297,015	+		Pf6N2E2_4565	0.76	-0.2
5,297,016	-		Pf6N2E2_4565	0.76	+0.0
5,297,253	-				-0.0
5,297,323	+				+0.5
5,297,323	+				+0.4
5,297,323	+				+0.7
5,297,324	-				+0.3
5,297,346	+				-0.3
5,297,347	-				-0.2
5,297,383	+				+0.1
5,297,383	+				+0.3
5,297,383	+				+1.4
5,297,383	+				+0.9
5,297,384	-				+0.5
5,297,417	+				+0.5
5,297,417	+				-0.1
5,297,417	+				-0.1
5,297,418	-				+0.7
5,297,430	+				-0.0
5,297,430	+				-0.1
5,297,430	+				-0.4
5,297,430	+				+0.1
5,297,430	+				+0.1
5,297,430	+				-0.1
5,297,430	+				-1.2
5,297,430	+				+0.3
5,297,431	-				-0.3
5,297,431	-				+0.3
5,297,431	-				+0.2
5,297,431	-				-0.6
5,297,431	-				+1.4
5,297,434	+				+0.3
5,297,435	-				+0.4
5,297,457	+				+0.4
5,297,457	+				+0.3
5,297,457	+				+0.8
5,297,593	-				+0.8
5,297,618	+				+0.1
5,298,060	+		Pf6N2E2_4566	0.42	-0.6
5,298,060	+		Pf6N2E2_4566	0.42	-0.3
5,298,061	-		Pf6N2E2_4566	0.43	-0.7
5,298,061	-		Pf6N2E2_4566	0.43	-0.4
5,298,061	-		Pf6N2E2_4566	0.43	-2.0
5,298,132	+		Pf6N2E2_4566	0.48	-0.4
5,298,133	-		Pf6N2E2_4566	0.49	+0.4
5,298,133	-		Pf6N2E2_4566	0.49	-0.4
5,298,237	+		Pf6N2E2_4566	0.57	-0.8
5,298,237	+		Pf6N2E2_4566	0.57	+0.0
5,298,430	-		Pf6N2E2_4566	0.73	-1.7
5,298,430	-		Pf6N2E2_4566	0.73	+0.3
5,298,442	-		Pf6N2E2_4566	0.74	+0.2
5,298,659	+				-0.3
5,298,679	-				-0.2
5,298,777	+				-0.3
5,298,777	+				+0.6
5,298,777	+				+0.1
5,298,777	+				+1.1
5,298,778	-				-0.5
5,298,778	-				-1.9
5,298,778	-				-0.8
5,298,778	-				+1.2
5,298,778	-				-1.6
5,298,778	-				+0.2
5,298,778	-				-0.2
5,298,780	-				-1.1
5,298,780	-				-0.3
5,298,780	-				-1.2
5,298,780	-				-1.5
5,298,780	-				+0.6
5,298,780	-				+0.2
5,299,005	+		Pf6N2E2_4567	0.27	-0.1
5,299,005	+		Pf6N2E2_4567	0.27	+0.5
5,299,005	+		Pf6N2E2_4567	0.27	+0.2
5,299,006	-		Pf6N2E2_4567	0.27	+0.6
5,299,006	-		Pf6N2E2_4567	0.27	+0.2
5,299,006	-		Pf6N2E2_4567	0.27	+0.4
5,299,182	+		Pf6N2E2_4567	0.60	-0.2
5,299,183	-		Pf6N2E2_4567	0.60	-0.1
5,299,445	+				+1.0
5,299,446	-				-0.2
5,299,470	+				+0.4
5,299,470	+				+0.9
5,299,471	-				+0.2
5,299,471	-				+1.1
5,299,471	-				+1.0
5,299,545	+				+0.5
5,299,545	+				+0.4
5,299,545	+				-0.1
5,299,545	+				+0.1
5,299,546	-				+0.1
5,299,546	-				+1.8
5,299,546	-				-0.0
5,299,546	-				+0.3
5,299,574	+				+1.5
5,299,574	+				+0.3
5,299,574	+				-0.4
5,299,574	+				-0.1
5,299,574	+				-0.3
5,299,575	-				+0.3
5,299,575	-				-0.4
5,299,575	-				-0.5
5,299,575	-				+0.8
5,299,575	-				-0.3
5,299,678	+		Pf6N2E2_4568	0.11	-1.7
5,299,678	+		Pf6N2E2_4568	0.11	-0.2
5,299,678	+		Pf6N2E2_4568	0.11	+0.5
5,299,678	+		Pf6N2E2_4568	0.11	+1.1
5,299,678	+		Pf6N2E2_4568	0.11	+0.4
5,299,678	+		Pf6N2E2_4568	0.11	+0.7
5,299,679	-		Pf6N2E2_4568	0.11	-0.3
5,299,679	-		Pf6N2E2_4568	0.11	-0.1
5,299,679	-		Pf6N2E2_4568	0.11	-1.1
5,299,679	-		Pf6N2E2_4568	0.11	-0.3
5,299,679	-		Pf6N2E2_4568	0.11	+0.6
5,299,679	-		Pf6N2E2_4568	0.11	+0.3