Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00756 and H281DRAFT_00757 are separated by 35 nucleotides H281DRAFT_00757 and H281DRAFT_00758 are separated by 403 nucleotides H281DRAFT_00758 and H281DRAFT_00759 are separated by 50 nucleotides H281DRAFT_00759 and H281DRAFT_00760 overlap by 4 nucleotides
H281DRAFT_00756: H281DRAFT_00756 - Enoyl-CoA hydratase/carnithine racemase, at 848,307 to 849,437
_00756
H281DRAFT_00757: H281DRAFT_00757 - hypothetical protein, at 849,473 to 849,898
_00757
H281DRAFT_00758: H281DRAFT_00758 - alkanesulfonate monooxygenase, at 850,302 to 851,462
_00758
H281DRAFT_00759: H281DRAFT_00759 - sulfonate transport system permease protein, at 851,513 to 852,379
_00759
H281DRAFT_00760: H281DRAFT_00760 - sulfonate transport system ATP-binding protein, at 852,376 to 853,380
_00760
Position (kb) 850
851
852 Strain fitness (log2 ratio) -2
-1
0
1
2 at 849.309 kb on - strand, within H281DRAFT_00756 at 849.713 kb on + strand at 849.770 kb on + strand, within H281DRAFT_00757 at 849.969 kb on + strand at 849.969 kb on + strand at 850.024 kb on + strand at 850.025 kb on - strand at 850.113 kb on + strand at 850.114 kb on - strand at 850.114 kb on - strand at 850.206 kb on + strand at 850.207 kb on - strand at 850.207 kb on - strand at 850.386 kb on + strand at 850.425 kb on + strand, within H281DRAFT_00758 at 850.887 kb on + strand, within H281DRAFT_00758 at 850.887 kb on + strand, within H281DRAFT_00758 at 850.887 kb on + strand, within H281DRAFT_00758 at 850.887 kb on + strand, within H281DRAFT_00758 at 850.888 kb on - strand, within H281DRAFT_00758 at 851.433 kb on + strand at 851.433 kb on + strand at 851.433 kb on + strand at 851.508 kb on + strand at 851.524 kb on + strand at 851.524 kb on + strand at 851.524 kb on + strand at 851.525 kb on - strand at 851.525 kb on - strand at 851.529 kb on + strand at 851.530 kb on - strand at 851.908 kb on + strand, within H281DRAFT_00759 at 851.908 kb on + strand, within H281DRAFT_00759 at 852.009 kb on - strand, within H281DRAFT_00759 at 852.009 kb on - strand, within H281DRAFT_00759 at 852.218 kb on + strand, within H281DRAFT_00759 at 852.356 kb on + strand at 852.357 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM remove 849,309 - H281DRAFT_00756 0.89 +0.6 849,713 + +2.2 849,770 + H281DRAFT_00757 0.70 -0.7 849,969 + -0.0 849,969 + +0.3 850,024 + -0.4 850,025 - -0.1 850,113 + -1.3 850,114 - +1.1 850,114 - -1.5 850,206 + -1.2 850,207 - +0.4 850,207 - +0.7 850,386 + -0.4 850,425 + H281DRAFT_00758 0.11 -0.5 850,887 + H281DRAFT_00758 0.50 -0.5 850,887 + H281DRAFT_00758 0.50 +1.6 850,887 + H281DRAFT_00758 0.50 +1.6 850,887 + H281DRAFT_00758 0.50 -0.2 850,888 - H281DRAFT_00758 0.50 -0.0 851,433 + +0.0 851,433 + +0.6 851,433 + +0.2 851,508 + -0.1 851,524 + +0.6 851,524 + +0.6 851,524 + +0.4 851,525 - -0.3 851,525 - -0.4 851,529 + +0.9 851,530 - +0.2 851,908 + H281DRAFT_00759 0.46 -1.0 851,908 + H281DRAFT_00759 0.46 +0.5 852,009 - H281DRAFT_00759 0.57 -0.4 852,009 - H281DRAFT_00759 0.57 -0.1 852,218 + H281DRAFT_00759 0.81 +0.2 852,356 + +0.3 852,357 - -2.1
Or see this region's nucleotide sequence