Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00567 and H281DRAFT_00568 are separated by 150 nucleotides H281DRAFT_00568 and H281DRAFT_00569 are separated by 186 nucleotides H281DRAFT_00569 and H281DRAFT_00570 are separated by 103 nucleotides H281DRAFT_00570 and H281DRAFT_00571 are separated by 60 nucleotides H281DRAFT_00571 and H281DRAFT_00572 are separated by 80 nucleotides H281DRAFT_00572 and H281DRAFT_00573 are separated by 141 nucleotides H281DRAFT_00573 and H281DRAFT_00574 are separated by 16 nucleotides
H281DRAFT_00567: H281DRAFT_00567 - glutamyl-tRNA synthetase, at 636,996 to 638,405
_00567
H281DRAFT_00568: H281DRAFT_00568 - tRNA_Ala_GGC, at 638,556 to 638,631
_00568
H281DRAFT_00569: H281DRAFT_00569 - tRNA_Glu_TTC, at 638,818 to 638,893
_00569
H281DRAFT_00570: H281DRAFT_00570 - tRNA_Asp_GTC, at 638,997 to 639,073
_00570
H281DRAFT_00571: H281DRAFT_00571 - tRNA_Glu_TTC, at 639,134 to 639,209
_00571
H281DRAFT_00572: H281DRAFT_00572 - tRNA_Asp_GTC, at 639,290 to 639,366
_00572
H281DRAFT_00573: H281DRAFT_00573 - Predicted acetyltransferase, at 639,508 to 639,972
_00573
H281DRAFT_00574: H281DRAFT_00574 - transcriptional regulator, AraC family, at 639,989 to 640,900
_00574
Position (kb) 639
640 Strain fitness (log2 ratio) -1
0
1 at 639.147 kb on - strand, within H281DRAFT_00571 at 639.298 kb on - strand at 639.311 kb on - strand, within H281DRAFT_00572 at 639.431 kb on - strand at 639.431 kb on - strand at 639.549 kb on + strand at 639.610 kb on + strand, within H281DRAFT_00573 at 639.611 kb on - strand, within H281DRAFT_00573 at 639.611 kb on - strand at 639.611 kb on - strand, within H281DRAFT_00573 at 639.613 kb on + strand, within H281DRAFT_00573 at 639.748 kb on - strand, within H281DRAFT_00573 at 639.799 kb on + strand, within H281DRAFT_00573 at 639.810 kb on + strand, within H281DRAFT_00573 at 639.811 kb on - strand, within H281DRAFT_00573 at 639.811 kb on - strand, within H281DRAFT_00573 at 639.811 kb on - strand, within H281DRAFT_00573 at 639.908 kb on - strand, within H281DRAFT_00573 at 639.991 kb on - strand at 640.043 kb on + strand at 640.044 kb on - strand at 640.325 kb on + strand, within H281DRAFT_00574
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM remove 639,147 - H281DRAFT_00571 0.17 -0.0 639,298 - +1.6 639,311 - H281DRAFT_00572 0.27 +0.2 639,431 - -1.5 639,431 - +0.3 639,549 + +0.1 639,610 + H281DRAFT_00573 0.22 -1.4 639,611 - H281DRAFT_00573 0.22 -0.0 639,611 - -0.4 639,611 - H281DRAFT_00573 0.22 -0.3 639,613 + H281DRAFT_00573 0.23 -0.3 639,748 - H281DRAFT_00573 0.52 -0.5 639,799 + H281DRAFT_00573 0.63 -0.3 639,810 + H281DRAFT_00573 0.65 -0.0 639,811 - H281DRAFT_00573 0.65 +0.5 639,811 - H281DRAFT_00573 0.65 +0.4 639,811 - H281DRAFT_00573 0.65 +1.0 639,908 - H281DRAFT_00573 0.86 -0.2 639,991 - -0.1 640,043 + +0.2 640,044 - +1.6 640,325 + H281DRAFT_00574 0.37 -0.0
Or see this region's nucleotide sequence