Experiment: Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00146 and H281DRAFT_00147 are separated by 96 nucleotides H281DRAFT_00147 and H281DRAFT_00148 are separated by 235 nucleotides
H281DRAFT_00146: H281DRAFT_00146 - adenosylcobyric acid synthase (glutamine-hydrolysing), at 151,095 to 152,609
_00146
H281DRAFT_00147: H281DRAFT_00147 - uncharacterized domain 1-containing protein, at 152,706 to 153,125
_00147
H281DRAFT_00148: H281DRAFT_00148 - chromosome partitioning protein, at 153,361 to 153,999
_00148
Position (kb) 152
153
154 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 151.980 kb on + strand, within H281DRAFT_00146 at 152.226 kb on + strand, within H281DRAFT_00146 at 152.433 kb on + strand, within H281DRAFT_00146 at 152.433 kb on + strand, within H281DRAFT_00146 at 152.433 kb on + strand, within H281DRAFT_00146 at 152.433 kb on + strand, within H281DRAFT_00146 at 152.434 kb on - strand, within H281DRAFT_00146 at 152.652 kb on + strand at 152.653 kb on - strand at 152.704 kb on + strand at 152.710 kb on + strand at 152.711 kb on - strand at 152.885 kb on + strand, within H281DRAFT_00147 at 152.920 kb on + strand, within H281DRAFT_00147 at 153.103 kb on + strand at 153.103 kb on + strand at 153.103 kb on + strand at 153.104 kb on - strand at 153.104 kb on - strand at 153.104 kb on - strand at 153.216 kb on - strand at 153.216 kb on - strand at 153.281 kb on + strand at 153.282 kb on - strand at 153.282 kb on - strand at 153.356 kb on + strand at 153.357 kb on - strand at 153.357 kb on - strand at 153.433 kb on + strand, within H281DRAFT_00148 at 153.636 kb on + strand, within H281DRAFT_00148 at 153.702 kb on + strand, within H281DRAFT_00148 at 153.877 kb on + strand, within H281DRAFT_00148 at 153.878 kb on - strand, within H281DRAFT_00148 at 154.041 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM remove 151,980 + H281DRAFT_00146 0.58 -2.9 152,226 + H281DRAFT_00146 0.75 -1.4 152,433 + H281DRAFT_00146 0.88 -1.4 152,433 + H281DRAFT_00146 0.88 -2.8 152,433 + H281DRAFT_00146 0.88 -1.7 152,433 + H281DRAFT_00146 0.88 -3.6 152,434 - H281DRAFT_00146 0.88 -1.9 152,652 + -1.9 152,653 - -0.8 152,704 + +0.7 152,710 + +0.9 152,711 - +0.2 152,885 + H281DRAFT_00147 0.43 +0.3 152,920 + H281DRAFT_00147 0.51 +0.3 153,103 + -0.8 153,103 + -0.3 153,103 + -0.3 153,104 - -0.9 153,104 - -1.0 153,104 - +0.1 153,216 - -1.1 153,216 - -0.1 153,281 + +0.1 153,282 - -0.1 153,282 - -0.0 153,356 + -0.4 153,357 - +0.8 153,357 - -0.2 153,433 + H281DRAFT_00148 0.11 -0.3 153,636 + H281DRAFT_00148 0.43 +0.0 153,702 + H281DRAFT_00148 0.53 -2.1 153,877 + H281DRAFT_00148 0.81 -0.3 153,878 - H281DRAFT_00148 0.81 -0.1 154,041 + +1.3
Or see this region's nucleotide sequence