Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03954

Experiment: PYE with Nalidixic 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.06 mg/ml
1,698,389	-		CCNA_01582	0.83	+0.9
1,698,396	-		CCNA_01582	0.85	+1.4
1,698,406	+		CCNA_01582	0.87	+0.3
1,698,421	+				-1.6
1,698,429	-				+0.1
1,698,721	-		CCNA_01583	0.19	-0.1
1,698,721	-		CCNA_01583	0.19	+1.6
1,698,762	+		CCNA_01583	0.23	-0.4
1,698,895	-		CCNA_01583	0.36	+3.5
1,699,027	+		CCNA_01583	0.49	+0.2
1,699,036	+				+1.4
1,699,044	+		CCNA_01583	0.50	+0.1
1,699,152	-		CCNA_01583	0.61	+1.6
1,699,164	+		CCNA_01583	0.62	-0.3
1,699,342	-				-0.6
1,699,484	-				+0.7
1,699,484	-				+1.1
1,699,578	-		CCNA_03954	0.89	-2.6
1,699,597	-				+0.8
1,699,607	-				-2.0
1,699,607	-				-0.9
1,699,678	-				-0.5
1,699,726	-				-1.8
1,699,786	-				-0.4
1,699,899	-				-0.6
1,699,939	-		CCNA_01584	0.11	+1.6
1,699,941	+		CCNA_01584	0.11	+1.4
1,699,971	+		CCNA_01584	0.12	+0.8
1,700,000	-		CCNA_01584	0.13	+1.7
1,700,013	+		CCNA_01584	0.14	+0.8
1,700,016	-		CCNA_01584	0.14	-0.8
1,700,021	-		CCNA_01584	0.14	-0.3
1,700,031	-		CCNA_01584	0.14	+0.3
1,700,063	+		CCNA_01584	0.16	+2.4
1,700,086	+		CCNA_01584	0.17	-1.3
1,700,124	+		CCNA_01584	0.18	+1.3
1,700,137	+		CCNA_01584	0.19	+0.8
1,700,139	-		CCNA_01584	0.19	-2.1
1,700,170	-		CCNA_01584	0.20	-0.7
1,700,202	+		CCNA_01584	0.22	+0.9
1,700,232	+		CCNA_01584	0.23	+0.4
1,700,240	-		CCNA_01584	0.23	-0.1
1,700,240	-		CCNA_01584	0.23	+0.5
1,700,244	+		CCNA_01584	0.23	+1.1
1,700,245	-		CCNA_01584	0.23	-0.8
1,700,250	-		CCNA_01584	0.24	+0.2
1,700,269	-		CCNA_01584	0.24	+3.2
1,700,276	+		CCNA_01584	0.25	+0.1
1,700,291	+				+2.9
1,700,299	-		CCNA_01584	0.26	-0.6
1,700,302	+		CCNA_01584	0.26	-0.4
1,700,320	-		CCNA_01584	0.27	+0.8
1,700,375	-		CCNA_01584	0.29	+0.9
1,700,390	-		CCNA_01584	0.30	+0.4
1,700,403	+		CCNA_01584	0.30	+2.8
1,700,411	-		CCNA_01584	0.30	+2.1
1,700,434	+		CCNA_01584	0.31	+1.9
1,700,439	+		CCNA_01584	0.32	+1.3
1,700,441	+		CCNA_01584	0.32	+1.6
1,700,452	-		CCNA_01584	0.32	-1.4
1,700,475	+		CCNA_01584	0.33	-1.6
1,700,483	-		CCNA_01584	0.33	+1.9
1,700,490	-		CCNA_01584	0.34	+0.6
1,700,553	+		CCNA_01584	0.36	+1.0
1,700,561	+		CCNA_01584	0.37	+3.6
1,700,565	-		CCNA_01584	0.37	-0.1
1,700,567	+		CCNA_01584	0.37	+2.0
1,700,569	-		CCNA_01584	0.37	+3.2
1,700,575	-		CCNA_01584	0.37	+1.3
1,700,592	+		CCNA_01584	0.38	+0.7