Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03353

Experiment: PYE with Nalidixic 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.06 mg/ml
3,530,300	+				+1.2
3,530,308	-				-0.1
3,530,308	-				+1.3
3,530,321	-				-0.0
3,530,323	+				+1.3
3,530,346	+				-1.4
3,530,352	+				-0.1
3,530,378	-				+0.2
3,530,385	+				+0.8
3,530,425	-				+1.4
3,530,427	+				-0.2
3,530,435	-				+2.5
3,530,454	-				-0.2
3,530,463	-				+0.9
3,530,481	+				+0.5
3,530,481	+				-0.2
3,530,489	-				+1.7
3,530,508	-				+0.5
3,530,536	+		CCNA_03352	0.12	-1.3
3,530,544	-		CCNA_03352	0.13	-3.3
3,530,615	-		CCNA_03352	0.22	-0.1
3,530,636	-		CCNA_03352	0.25	-1.8
3,530,671	+		CCNA_03352	0.29	-2.1
3,530,678	-		CCNA_03352	0.30	+1.5
3,530,678	-		CCNA_03352	0.30	+0.9
3,530,678	-		CCNA_03352	0.30	+0.9
3,530,678	-		CCNA_03352	0.30	+1.5
3,530,685	+		CCNA_03352	0.31	-1.4
3,530,770	+		CCNA_03352	0.43	-0.8
3,530,790	-		CCNA_03352	0.45	-3.4
3,530,816	-		CCNA_03352	0.49	-1.1
3,530,857	-		CCNA_03352	0.54	+1.2
3,530,886	+		CCNA_03352	0.58	-0.1
3,530,934	+		CCNA_03352	0.64	-0.5
3,530,942	-		CCNA_03352	0.65	-1.6
3,531,031	+		CCNA_03352	0.77	+0.2
3,531,033	-		CCNA_03352	0.77	+0.9
3,531,039	-		CCNA_03352	0.78	-1.0
3,531,086	+		CCNA_03352	0.84	+1.1
3,531,091	+		CCNA_03352	0.85	+0.9
3,531,094	-		CCNA_03352	0.85	-2.5
3,531,098	-		CCNA_03352	0.86	-3.0
3,531,132	-				-0.5
3,531,133	+				-1.1
3,531,160	+				-0.4
3,531,170	+				-1.5
3,531,213	+				-1.0
3,531,215	-				+1.2
3,531,239	-				-0.1
3,531,248	+				-0.0
3,531,264	-				+1.5
3,531,295	+				+0.9
3,531,295	+				-1.2
3,531,303	-				-0.5
3,531,303	-				+0.6
3,531,303	-				+0.5
3,531,344	+				-1.2
3,531,352	-				+1.7
3,531,352	-				+1.9
3,531,496	+		CCNA_03353	0.24	+1.4
3,531,500	-		CCNA_03353	0.24	+1.8
3,531,504	-		CCNA_03353	0.25	+3.0
3,531,504	-		CCNA_03353	0.25	+3.0
3,531,504	-		CCNA_03353	0.25	+2.0
3,531,504	-		CCNA_03353	0.25	+2.2
3,531,504	-		CCNA_03353	0.25	+4.7
3,531,506	+		CCNA_03353	0.25	+0.2
3,531,544	+		CCNA_03353	0.29	+4.1
3,531,547	-		CCNA_03353	0.30	+1.6
3,531,578	-		CCNA_03353	0.34	+3.2
3,531,580	+		CCNA_03353	0.34	+3.2
3,531,584	-		CCNA_03353	0.34	+1.0
3,531,624	-		CCNA_03353	0.39	+4.0
3,531,698	+		CCNA_03353	0.48	+3.2
3,531,698	+		CCNA_03353	0.48	-1.5
3,531,706	-		CCNA_03353	0.49	+2.0
3,531,706	-		CCNA_03353	0.49	+3.4
3,531,768	-		CCNA_03353	0.56	+2.1
3,531,808	-		CCNA_03353	0.61	+1.6
3,531,808	-		CCNA_03353	0.61	+6.5
3,531,840	+		CCNA_03353	0.65	-0.9
3,531,848	-		CCNA_03353	0.66	+4.3
3,531,848	-		CCNA_03353	0.66	+3.9
3,531,848	-		CCNA_03353	0.66	+3.7
3,531,848	-		CCNA_03353	0.66	+5.7
3,531,870	-		CCNA_03353	0.69	-0.2
3,531,875	-		CCNA_03353	0.69	+0.4
3,531,882	+		CCNA_03353	0.70	+1.6
3,531,884	+		CCNA_03353	0.70	+1.2
3,531,884	+		CCNA_03353	0.70	+0.9
3,531,890	-		CCNA_03353	0.71	+1.6
3,531,892	-		CCNA_03353	0.71	+3.2
3,531,892	-		CCNA_03353	0.71	+3.4
3,531,892	-		CCNA_03353	0.71	+1.9
3,531,897	-		CCNA_03353	0.72	-0.1
3,531,897	-		CCNA_03353	0.72	+3.2
3,531,914	-		CCNA_03353	0.74	+0.8
3,531,914	-		CCNA_03353	0.74	+4.1
3,531,935	-		CCNA_03353	0.76	+2.5
3,531,935	-		CCNA_03353	0.76	+3.5
3,531,947	+		CCNA_03353	0.78	-0.4
3,531,947	+		CCNA_03353	0.78	+1.4
3,531,955	+		CCNA_03353	0.79	-0.1
3,531,955	-		CCNA_03353	0.79	+1.9
3,531,955	-		CCNA_03353	0.79	+2.9
3,531,955	-		CCNA_03353	0.79	+2.6
3,531,955	-		CCNA_03353	0.79	+1.9
3,531,970	+		CCNA_03353	0.81	+2.1
3,531,978	-		CCNA_03353	0.82	+0.6
3,531,978	-		CCNA_03353	0.82	+2.5
3,531,978	-		CCNA_03353	0.82	+5.9
3,531,978	-		CCNA_03353	0.82	+4.2
3,532,017	-		CCNA_03353	0.86	+3.0
3,532,066	-				+1.2
3,532,125	+				-1.1
3,532,133	-				-1.0
3,532,150	-				+0.8
3,532,150	-				+0.9
3,532,150	-				-0.7
3,532,160	+				+0.6
3,532,173	-				-0.8
3,532,217	-				-0.5
3,532,330	+		CCNA_03354	0.27	-0.1
3,532,338	-				+1.9
3,532,338	-		CCNA_03354	0.29	+0.8
3,532,338	-		CCNA_03354	0.29	-0.1
3,532,373	+		CCNA_03354	0.34	+0.2
3,532,405	-		CCNA_03354	0.39	+3.6
3,532,405	-		CCNA_03354	0.39	-0.2
3,532,444	+		CCNA_03354	0.45	-1.9
3,532,452	-		CCNA_03354	0.46	+2.0
3,532,455	+		CCNA_03354	0.47	+0.9
3,532,504	-		CCNA_03354	0.54	+1.0
3,532,505	+		CCNA_03354	0.55	+2.6
3,532,506	+		CCNA_03354	0.55	+1.6
3,532,523	-		CCNA_03354	0.57	+2.6
3,532,523	-		CCNA_03354	0.57	+0.9
3,532,558	-				+1.2
3,532,558	-		CCNA_03354	0.63	-1.0
3,532,783	+				-1.4
3,532,810	-				+1.0
3,532,817	-				-0.4
3,532,855	-				+0.2
3,532,857	+				-1.5
3,532,865	-				-0.0
3,532,909	+				-0.3
3,532,945	-				-2.3
3,532,977	+				-2.4
3,533,000	+				+0.1
3,533,000	+				-0.1
3,533,000	+				-0.9
3,533,071	+				+0.7
3,533,080	-				-0.2
3,533,099	+				-1.2
3,533,113	-				-2.7
3,533,114	+				-1.5
3,533,122	-				-2.9
3,533,124	+				-0.4