Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03150

Experiment: PYE with Nalidixic 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.06 mg/ml
3,305,133	+		CCNA_03149	0.59	-2.3
3,305,184	-		CCNA_03149	0.61	+0.4
3,305,198	-		CCNA_03149	0.62	-0.5
3,305,199	-		CCNA_03149	0.62	-0.9
3,305,212	+		CCNA_03149	0.62	-0.3
3,305,212	+		CCNA_03149	0.62	+0.3
3,305,212	+		CCNA_03149	0.62	+0.6
3,305,212	+		CCNA_03149	0.62	-2.6
3,305,213	-		CCNA_03149	0.62	-1.3
3,305,220	-		CCNA_03149	0.62	-0.0
3,305,220	-		CCNA_03149	0.62	+1.0
3,305,220	-		CCNA_03149	0.62	-0.1
3,305,220	-		CCNA_03149	0.62	-0.0
3,305,224	+		CCNA_03149	0.63	+1.3
3,305,237	-		CCNA_03149	0.63	-0.9
3,305,243	-		CCNA_03149	0.63	-1.2
3,305,260	-		CCNA_03149	0.64	-0.6
3,305,265	+		CCNA_03149	0.64	+0.3
3,305,357	-		CCNA_03149	0.68	-0.1
3,305,400	+		CCNA_03149	0.70	-0.0
3,305,401	+		CCNA_03149	0.70	-0.4
3,305,419	-		CCNA_03149	0.71	+0.0
3,305,419	-		CCNA_03149	0.71	+0.9
3,305,435	+		CCNA_03149	0.71	-1.2
3,305,443	-		CCNA_03149	0.72	-0.8
3,305,461	+		CCNA_03149	0.72	-0.4
3,305,537	-		CCNA_03149	0.76	-1.7
3,305,573	+		CCNA_03149	0.77	+1.1
3,305,625	-		CCNA_03149	0.79	+2.1
3,305,625	-		CCNA_03149	0.79	-1.9
3,305,652	+		CCNA_03149	0.80	-2.1
3,305,652	+		CCNA_03149	0.80	-0.1
3,305,660	-		CCNA_03149	0.81	+1.0
3,305,743	-		CCNA_03149	0.84	+0.5
3,305,769	+		CCNA_03149	0.85	+1.3
3,305,769	+		CCNA_03149	0.85	+0.4
3,305,769	+		CCNA_03149	0.85	+1.2
3,305,769	+		CCNA_03149	0.85	-0.9
3,305,769	+		CCNA_03149	0.85	-1.2
3,305,777	-		CCNA_03149	0.85	-0.3
3,305,777	-		CCNA_03149	0.85	-1.3
3,305,777	-		CCNA_03149	0.85	+1.7
3,305,777	-		CCNA_03149	0.85	+0.1
3,305,811	+		CCNA_03149	0.87	+1.0
3,305,811	+		CCNA_03149	0.87	-0.3
3,305,826	+		CCNA_03149	0.87	-0.2
3,305,834	-		CCNA_03149	0.88	+2.2
3,305,835	+		CCNA_03149	0.88	+0.6
3,305,846	+		CCNA_03149	0.88	-0.2
3,305,864	-		CCNA_03149	0.89	+0.6
3,305,890	+				-0.7
3,305,952	+				-1.2
3,305,952	+				-0.1
3,305,960	-				-2.1
3,305,960	-				+3.7
3,305,965	+				+0.6
3,305,973	-				+1.5
3,306,100	-				-1.5
3,306,187	-		CCNA_03150	0.38	+4.5
3,306,197	-		CCNA_03150	0.45	-1.0
3,306,197	-		CCNA_03150	0.45	-1.7
3,306,197	-		CCNA_03150	0.45	+2.7
3,306,197	-				+3.7
3,306,197	-		CCNA_03150	0.45	-0.4
3,306,197	-		CCNA_03150	0.45	-1.9
3,306,217	-		CCNA_03150	0.57	+5.1
3,306,238	+		CCNA_03150	0.70	+0.7
3,306,349	-				-2.5
3,306,353	+				+1.3
3,306,361	-				-2.4
3,306,361	-				-1.4
3,306,361	-				+0.1
3,306,361	-				-1.8
3,306,362	+				-0.7
3,306,362	+				-1.0
3,306,370	-				-0.3
3,306,370	-				+1.0
3,306,398	-				-0.6
3,306,421	+				-1.7
3,306,429	-				+1.9
3,306,437	-				-0.0
3,306,447	-				-0.8
3,306,467	+				-2.2
3,306,566	+		CCNA_03151	0.14	+1.0
3,306,580	-		CCNA_03151	0.15	-1.8
3,306,608	+		CCNA_03151	0.16	-0.0
3,306,616	-		CCNA_03151	0.17	+2.0
3,306,617	+		CCNA_03151	0.17	+0.7
3,306,674	-		CCNA_03151	0.20	-0.8
3,306,762	-		CCNA_03151	0.24	+0.7
3,306,771	+		CCNA_03151	0.25	-0.2
3,306,771	+		CCNA_03151	0.25	-0.7
3,306,771	+		CCNA_03151	0.25	+1.9
3,306,779	-		CCNA_03151	0.25	-1.5
3,306,797	+		CCNA_03151	0.26	+0.8
3,306,806	+		CCNA_03151	0.26	-0.0
3,306,865	+		CCNA_03151	0.30	-0.8
3,306,889	-		CCNA_03151	0.31	-0.6
3,306,912	-		CCNA_03151	0.32	+0.3
3,306,917	-		CCNA_03151	0.32	-0.7
3,306,943	-		CCNA_03151	0.34	-0.5
3,306,962	+		CCNA_03151	0.35	-1.5
3,306,962	+				+1.7
3,306,962	+		CCNA_03151	0.35	+1.0
3,306,962	+		CCNA_03151	0.35	+1.0
3,306,970	-		CCNA_03151	0.35	-0.2
3,306,970	-		CCNA_03151	0.35	-2.0
3,306,970	-		CCNA_03151	0.35	+0.1
3,306,970	-		CCNA_03151	0.35	+0.4
3,306,997	-		CCNA_03151	0.36	+0.6
3,306,997	-		CCNA_03151	0.36	-1.1
3,307,018	+		CCNA_03151	0.38	-1.4
3,307,026	-		CCNA_03151	0.38	-0.2
3,307,037	-		CCNA_03151	0.39	-1.8
3,307,058	+		CCNA_03151	0.40	+0.6
3,307,066	+		CCNA_03151	0.40	+0.8
3,307,067	+		CCNA_03151	0.40	+0.5
3,307,075	-				+2.3
3,307,075	-		CCNA_03151	0.41	+0.8
3,307,079	+		CCNA_03151	0.41	-2.0
3,307,092	+		CCNA_03151	0.41	+0.1
3,307,150	+		CCNA_03151	0.44	-0.9
3,307,150	+		CCNA_03151	0.44	-0.5
3,307,156	-		CCNA_03151	0.45	+2.5
3,307,168	+		CCNA_03151	0.45	-0.6
3,307,176	-		CCNA_03151	0.46	-0.0
3,307,179	+		CCNA_03151	0.46	-0.7
3,307,217	+		CCNA_03151	0.48	+0.3
3,307,218	+		CCNA_03151	0.48	+0.3
3,307,218	+		CCNA_03151	0.48	-0.0
3,307,225	-		CCNA_03151	0.48	+0.5
3,307,225	-		CCNA_03151	0.48	-0.7
3,307,253	+		CCNA_03151	0.50	+0.3