Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02984

Experiment: PYE with Nalidixic 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.06 mg/ml
3,138,321	-				-1.1
3,138,363	+				+1.4
3,138,387	+				-1.3
3,138,387	+				-0.8
3,138,388	+				+0.8
3,138,390	-				+0.3
3,138,461	+		CCNA_02983	0.13	-0.3
3,138,464	-		CCNA_02983	0.14	+0.0
3,138,466	+		CCNA_02983	0.14	-0.5
3,138,469	-		CCNA_02983	0.14	-0.2
3,138,496	-		CCNA_02983	0.17	-0.6
3,138,513	-		CCNA_02983	0.19	+0.7
3,138,530	+		CCNA_02983	0.20	+0.1
3,138,570	+		CCNA_02983	0.24	+1.2
3,138,578	-		CCNA_02983	0.25	-1.3
3,138,578	-		CCNA_02983	0.25	+1.7
3,138,578	-		CCNA_02983	0.25	+0.6
3,138,597	-		CCNA_02983	0.27	-0.9
3,138,633	-		CCNA_02983	0.31	+0.1
3,138,673	-		CCNA_02983	0.35	-1.9
3,138,711	+		CCNA_02983	0.39	+0.6
3,138,730	+		CCNA_02983	0.40	-0.4
3,138,735	+		CCNA_02983	0.41	+2.8
3,138,735	+		CCNA_02983	0.41	-0.0
3,138,735	+		CCNA_02983	0.41	-1.4
3,138,735	+		CCNA_02983	0.41	+0.1
3,138,735	+		CCNA_02983	0.41	-1.9
3,138,738	-		CCNA_02983	0.41	-0.7
3,138,738	-		CCNA_02983	0.41	-0.9
3,138,743	-		CCNA_02983	0.42	-1.3
3,138,743	-		CCNA_02983	0.42	-1.0
3,138,790	+		CCNA_02983	0.47	-1.8
3,138,790	+		CCNA_02983	0.47	+1.6
3,138,790	+		CCNA_02983	0.47	+0.8
3,138,790	+		CCNA_02983	0.47	-0.3
3,138,798	-		CCNA_02983	0.47	+1.0
3,138,830	-		CCNA_02983	0.51	-0.4
3,138,837	+		CCNA_02983	0.51	-2.1
3,138,855	+		CCNA_02983	0.53	-2.9
3,138,880	+		CCNA_02983	0.56	-1.1
3,138,888	+		CCNA_02983	0.56	-0.9
3,138,908	-		CCNA_02983	0.58	-0.4
3,138,918	+		CCNA_02983	0.59	+0.7
3,138,930	+		CCNA_02983	0.61	-0.1
3,138,943	-		CCNA_02983	0.62	+1.2
3,138,944	+		CCNA_02983	0.62	+2.3
3,138,944	+		CCNA_02983	0.62	+1.7
3,138,952	-		CCNA_02983	0.63	-0.9
3,138,958	+		CCNA_02983	0.63	-0.2
3,138,963	+		CCNA_02983	0.64	-1.4
3,138,971	-		CCNA_02983	0.65	-0.7
3,139,018	-		CCNA_02983	0.69	-0.2
3,139,040	+		CCNA_02983	0.72	+2.3
3,139,080	-		CCNA_02983	0.76	-0.8
3,139,100	-		CCNA_02983	0.78	+0.6
3,139,102	+		CCNA_02983	0.78	+1.5
3,139,102	+		CCNA_02983	0.78	-0.2
3,139,107	+		CCNA_02983	0.78	+0.6
3,139,162	+		CCNA_02983	0.84	+1.0
3,139,207	+				+1.3
3,139,207	+		CCNA_02983	0.89	+2.2
3,139,210	-		CCNA_02983	0.89	+0.3
3,139,210	-		CCNA_02983	0.89	-0.0
3,139,267	+				+0.2
3,139,291	+				-2.1
3,139,315	+				+2.3
3,139,332	+				-2.3
3,139,332	+				+1.9
3,139,332	+				-0.4
3,139,332	+				-1.7
3,139,332	+				-0.3
3,139,332	+				+1.6
3,139,340	-				-1.8
3,139,340	-				-1.8
3,139,376	-		CCNA_02984	0.13	-0.9
3,139,376	-		CCNA_02984	0.13	-1.3
3,139,392	+		CCNA_02984	0.17	-0.0
3,139,394	+		CCNA_02984	0.17	-1.9
3,139,423	+		CCNA_02984	0.24	+1.1
3,139,429	+		CCNA_02984	0.25	+2.0
3,139,429	+		CCNA_02984	0.25	+3.5
3,139,506	+		CCNA_02984	0.43	+1.2
3,139,511	+		CCNA_02984	0.44	+2.2
3,139,519	-		CCNA_02984	0.45	-0.6
3,139,526	+		CCNA_02984	0.47	-1.4
3,139,562	+		CCNA_02984	0.55	+0.3
3,139,570	-		CCNA_02984	0.57	+0.3
3,139,593	+		CCNA_02984	0.62	+0.5
3,139,602	-		CCNA_02984	0.64	-1.5
3,139,602	-		CCNA_02984	0.64	-1.5
3,139,606	-		CCNA_02984	0.65	+1.1
3,139,606	-		CCNA_02984	0.65	+3.1
3,139,608	+		CCNA_02984	0.66	+1.3
3,139,613	+		CCNA_02984	0.67	-0.9
3,139,621	-		CCNA_02984	0.68	+0.1
3,139,628	+		CCNA_02984	0.70	+1.5
3,139,634	+		CCNA_02984	0.71	+2.2
3,139,662	+		CCNA_02984	0.78	-0.5
3,139,679	+		CCNA_02984	0.82	+1.8
3,139,735	+				-1.2
3,139,807	+				-1.2
3,139,827	+				-0.5
3,139,973	+		CCNA_02985	0.29	+1.7
3,140,002	+		CCNA_02985	0.33	+2.5
3,140,002	+		CCNA_02985	0.33	+3.6
3,140,035	-		CCNA_02985	0.38	+0.7
3,140,035	-		CCNA_02985	0.38	-0.9
3,140,049	+		CCNA_02985	0.40	+2.6
3,140,049	+		CCNA_02985	0.40	+1.6
3,140,067	+		CCNA_02985	0.42	+0.9
3,140,067	-		CCNA_02985	0.42	-1.5
3,140,075	-		CCNA_02985	0.43	-1.3
3,140,075	-		CCNA_02985	0.43	-0.5
3,140,108	+		CCNA_02985	0.48	+1.5
3,140,116	-		CCNA_02985	0.49	+1.0
3,140,116	-		CCNA_02985	0.49	-0.0
3,140,116	-		CCNA_02985	0.49	+1.0
3,140,116	-		CCNA_02985	0.49	-1.2
3,140,122	-		CCNA_02985	0.50	-2.1
3,140,128	+		CCNA_02985	0.51	+1.5
3,140,136	-		CCNA_02985	0.52	-1.3
3,140,147	+		CCNA_02985	0.53	+2.3
3,140,147	+		CCNA_02985	0.53	-0.7
3,140,150	-		CCNA_02985	0.54	-1.1
3,140,195	+		CCNA_02985	0.60	+1.8
3,140,208	-		CCNA_02985	0.62	+1.8
3,140,215	+		CCNA_02985	0.63	-1.2
3,140,223	-		CCNA_02985	0.64	-1.5
3,140,230	+		CCNA_02985	0.65	-0.6
3,140,233	-		CCNA_02985	0.65	+0.5
3,140,245	+		CCNA_02985	0.67	+0.1
3,140,245	+		CCNA_02985	0.67	-1.7
3,140,245	+		CCNA_02985	0.67	-1.9
3,140,245	+		CCNA_02985	0.67	+2.0
3,140,245	+		CCNA_02985	0.67	+0.9
3,140,245	+		CCNA_02985	0.67	+0.5
3,140,245	+		CCNA_02985	0.67	-0.5
3,140,253	-		CCNA_02985	0.68	+1.5
3,140,253	-		CCNA_02985	0.68	-0.6
3,140,253	-		CCNA_02985	0.68	-2.0
3,140,253	-		CCNA_02985	0.68	+1.7
3,140,253	-		CCNA_02985	0.68	-1.7
3,140,253	-		CCNA_02985	0.68	-0.8
3,140,258	+		CCNA_02985	0.69	+1.6
3,140,302	-		CCNA_02985	0.75	-1.1
3,140,320	+		CCNA_02985	0.77	-0.8
3,140,383	+		CCNA_02985	0.86	-0.7
3,140,383	+		CCNA_02985	0.86	-2.8
3,140,391	-		CCNA_02985	0.87	-2.0
3,140,488	-				-0.5
3,140,488	-				-1.4
3,140,494	+				-2.6
3,140,494	+				+0.1
3,140,501	-				+0.5
3,140,526	+				+1.6
3,140,532	-				+4.0
3,140,564	+				-1.6
3,140,757	+		CCNA_02986	0.14	-1.9