Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02417

Experiment: PYE with Nalidixic 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.06 mg/ml
2,559,539	+		CCNA_02415	0.29	-1.8
2,559,554	-		CCNA_02415	0.32	+0.2
2,559,601	+		CCNA_02415	0.44	+0.0
2,559,601	+		CCNA_02415	0.44	+0.1
2,559,601	+		CCNA_02415	0.44	-0.2
2,559,622	+		CCNA_02415	0.49	+0.3
2,559,664	-		CCNA_02415	0.59	-0.8
2,559,680	+		CCNA_02415	0.63	+0.9
2,559,688	-		CCNA_02415	0.65	-1.0
2,559,697	+		CCNA_02415	0.67	-1.3
2,559,697	+		CCNA_02415	0.67	-2.1
2,559,697	+		CCNA_02415	0.67	-1.8
2,559,697	+		CCNA_02415	0.67	-0.3
2,559,697	+		CCNA_02415	0.67	-2.7
2,559,697	+		CCNA_02415	0.67	-1.9
2,559,697	+		CCNA_02415	0.67	-1.1
2,559,697	+		CCNA_02415	0.67	+0.4
2,559,697	+		CCNA_02415	0.67	-0.9
2,559,705	-		CCNA_02415	0.69	+0.8
2,559,705	-		CCNA_02415	0.69	-2.2
2,559,705	-		CCNA_02415	0.69	+1.9
2,559,705	-		CCNA_02415	0.69	-0.8
2,559,705	-		CCNA_02415	0.69	-0.2
2,559,737	-		CCNA_02415	0.77	-1.3
2,559,739	+		CCNA_02415	0.78	-0.4
2,559,747	-		CCNA_02415	0.80	-1.2
2,559,795	-				-0.7
2,559,843	-				+1.1
2,559,843	-				-1.0
2,559,934	+				+1.1
2,559,934	+				-1.7
2,559,942	-				-0.6
2,559,942	-				+1.3
2,559,942	-				-0.7
2,559,942	-				-2.2
2,559,956	+				-1.1
2,559,958	+				-0.1
2,559,958	+				-2.0
2,559,958	+				+0.1
2,559,961	+				+0.2
2,559,966	-				+0.9
2,559,979	+				-2.2
2,560,104	-				+0.3
2,560,112	-				-1.4
2,560,127	-				+2.8
2,560,153	+				+1.0
2,560,198	+		CCNA_02416	0.22	+0.8
2,560,198	+		CCNA_02416	0.22	+1.6
2,560,198	+		CCNA_02416	0.22	+0.8
2,560,198	+		CCNA_02416	0.22	+0.7
2,560,198	+		CCNA_02416	0.22	+2.2
2,560,198	+		CCNA_02416	0.22	+1.3
2,560,206	-		CCNA_02416	0.25	+0.0
2,560,244	+		CCNA_02416	0.39	+0.6
2,560,285	+		CCNA_02416	0.53	+1.5
2,560,293	-		CCNA_02416	0.56	-0.6
2,560,297	+		CCNA_02416	0.58	+1.2
2,560,299	-		CCNA_02416	0.58	-0.9
2,560,304	-		CCNA_02416	0.60	+1.0
2,560,306	+		CCNA_02416	0.61	+2.0
2,560,306	+		CCNA_02416	0.61	+1.8
2,560,325	-		CCNA_02416	0.68	-0.4
2,560,371	+		CCNA_02416	0.84	-0.0
2,560,381	+		CCNA_02416	0.88	+1.5
2,560,416	-				+0.0
2,560,474	+				+1.0
2,560,502	-				+2.2
2,560,612	+				-0.7
2,560,627	-				+1.3
2,560,632	+				-0.0
2,560,656	+				+1.0
2,560,664	-		CCNA_02417	0.10	-0.6
2,560,673	+		CCNA_02417	0.11	+1.7
2,560,681	-		CCNA_02417	0.12	-1.3
2,560,682	-		CCNA_02417	0.12	-1.0
2,560,714	+		CCNA_02417	0.14	-2.4
2,560,724	+		CCNA_02417	0.15	-0.2
2,560,724	+		CCNA_02417	0.15	-1.1
2,560,745	+		CCNA_02417	0.17	-3.2
2,560,772	-		CCNA_02417	0.19	-1.8
2,560,844	-		CCNA_02417	0.25	-0.4
2,560,845	-		CCNA_02417	0.25	+0.5
2,560,877	-		CCNA_02417	0.28	-0.1
2,560,882	-		CCNA_02417	0.28	+1.6
2,560,888	-		CCNA_02417	0.29	-2.2
2,560,907	+		CCNA_02417	0.30	-1.9
2,560,928	-		CCNA_02417	0.32	-0.2
2,560,954	+		CCNA_02417	0.34	-1.4
2,560,980	-		CCNA_02417	0.36	+0.5
2,561,078	+		CCNA_02417	0.44	-1.6
2,561,085	-		CCNA_02417	0.45	+0.6
2,561,144	+		CCNA_02417	0.49	-2.4
2,561,191	+		CCNA_02417	0.53	-0.7
2,561,196	+		CCNA_02417	0.54	+0.4
2,561,227	+		CCNA_02417	0.56	-1.7
2,561,238	+		CCNA_02417	0.57	+2.3
2,561,245	-		CCNA_02417	0.58	-0.0
2,561,248	+		CCNA_02417	0.58	-1.7
2,561,304	-		CCNA_02417	0.62	+0.1
2,561,304	-		CCNA_02417	0.62	+1.8
2,561,316	-		CCNA_02417	0.63	-0.4
2,561,321	-		CCNA_02417	0.64	-2.3
2,561,372	-		CCNA_02417	0.68	+0.3
2,561,377	-		CCNA_02417	0.68	-0.3
2,561,383	+		CCNA_02417	0.69	+2.6
2,561,387	+		CCNA_02417	0.69	+1.2
2,561,395	-		CCNA_02417	0.70	-0.1
2,561,419	+		CCNA_02417	0.72	+1.9
2,561,419	+		CCNA_02417	0.72	-1.4
2,561,427	-		CCNA_02417	0.72	+1.9
2,561,427	-		CCNA_02417	0.72	+0.5
2,561,429	+		CCNA_02417	0.73	-0.1
2,561,429	+		CCNA_02417	0.73	-1.9
2,561,429	+		CCNA_02417	0.73	-1.3
2,561,437	-		CCNA_02417	0.73	-0.4
2,561,437	-		CCNA_02417	0.73	-0.6
2,561,437	-		CCNA_02417	0.73	-2.3
2,561,463	-		CCNA_02417	0.75	-4.1
2,561,473	+		CCNA_02417	0.76	-1.5
2,561,549	+		CCNA_02417	0.82	+0.8
2,561,557	+		CCNA_02417	0.83	+0.0
2,561,557	+		CCNA_02417	0.83	+0.2
2,561,565	-		CCNA_02417	0.84	-2.2
2,561,647	-				+0.9
2,561,659	-				-1.0
2,561,703	-				-1.1
2,561,718	+				+0.5
2,561,728	-				+0.0
2,561,757	-				-1.0
2,561,759	+				-0.6
2,561,759	+				+2.5
2,561,759	+				+0.6
2,561,759	+				+1.7
2,561,759	+				+1.7
2,561,759	+				+3.1
2,561,759	+				-3.4
2,561,767	-				+1.9
2,561,767	-				-0.6
2,561,767	-				-0.1
2,561,817	-				+0.9
2,561,870	+				+0.2
2,561,892	-				-1.7
2,561,915	+		CCNA_02418	0.10	+0.7
2,561,966	+		CCNA_02418	0.14	+0.0
2,561,988	+		CCNA_02418	0.15	+0.5
2,562,001	+		CCNA_02418	0.16	+3.1
2,562,006	-		CCNA_02418	0.17	-1.0
2,562,006	-		CCNA_02418	0.17	-2.2
2,562,041	+		CCNA_02418	0.19	-1.3
2,562,049	-		CCNA_02418	0.20	-0.4
2,562,051	+		CCNA_02418	0.20	+1.8
2,562,056	+		CCNA_02418	0.20	-2.7
2,562,085	+		CCNA_02418	0.22	-0.5
2,562,093	-		CCNA_02418	0.23	-1.0
2,562,093	-		CCNA_02418	0.23	-1.4
2,562,171	-		CCNA_02418	0.28	-0.1
2,562,177	+		CCNA_02418	0.29	+1.5
2,562,181	-		CCNA_02418	0.29	+0.7
2,562,185	-		CCNA_02418	0.29	+0.1
2,562,252	-		CCNA_02418	0.34	+0.8
2,562,253	-		CCNA_02418	0.34	-0.1
2,562,271	-		CCNA_02418	0.35	+1.2
2,562,286	-		CCNA_02418	0.36	-1.8
2,562,295	+		CCNA_02418	0.37	+0.6
2,562,295	+		CCNA_02418	0.37	+0.4
2,562,302	+		CCNA_02418	0.37	-1.3
2,562,368	-		CCNA_02418	0.42	+1.8
2,562,396	+		CCNA_02418	0.44	+1.3
2,562,397	+		CCNA_02418	0.44	-0.3
2,562,397	+		CCNA_02418	0.44	-0.1
2,562,405	-		CCNA_02418	0.44	-1.6
2,562,436	+		CCNA_02418	0.47	+1.2
2,562,441	+		CCNA_02418	0.47	-0.0
2,562,451	+		CCNA_02418	0.48	-0.7
2,562,451	+		CCNA_02418	0.48	-0.1
2,562,468	+		CCNA_02418	0.49	+1.5
2,562,468	+		CCNA_02418	0.49	-1.4
2,562,486	-		CCNA_02418	0.50	+1.0
2,562,496	-		CCNA_02418	0.51	-0.4
2,562,496	-		CCNA_02418	0.51	-0.3
2,562,511	+		CCNA_02418	0.52	-0.5
2,562,511	+		CCNA_02418	0.52	+3.0
2,562,519	-		CCNA_02418	0.52	-0.1
2,562,591	+		CCNA_02418	0.57	+2.5
2,562,591	-		CCNA_02418	0.57	+1.1
2,562,615	+		CCNA_02418	0.59	+2.0
2,562,704	+		CCNA_02418	0.65	-0.5
2,562,704	+		CCNA_02418	0.65	+1.1
2,562,704	+		CCNA_02418	0.65	+0.4
2,562,704	+		CCNA_02418	0.65	+2.2
2,562,712	-		CCNA_02418	0.66	-1.8
2,562,735	-		CCNA_02418	0.67	+2.8
2,562,756	+		CCNA_02418	0.69	+0.5