Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01730

Experiment: PYE with Nalidixic 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Nalidixic 0.06 mg/ml
1,857,263	-				-2.0
1,857,360	-		CCNA_01729	0.13	-0.3
1,857,541	-		CCNA_01729	0.31	+0.6
1,857,570	+		CCNA_01729	0.34	-0.6
1,857,797	+		CCNA_01729	0.57	+0.1
1,857,797	+		CCNA_01729	0.57	+0.6
1,857,825	+		CCNA_01729	0.59	+0.8
1,857,868	-		CCNA_01729	0.64	-0.2
1,857,878	-		CCNA_01729	0.64	+0.3
1,857,878	-		CCNA_01729	0.64	+0.6
1,857,947	+		CCNA_01729	0.71	-0.4
1,857,948	-		CCNA_01729	0.71	+0.6
1,858,029	-		CCNA_01729	0.79	-0.1
1,858,184	-				+0.8
1,858,264	-				+1.5
1,858,269	-				-0.2
1,858,313	-				+1.9
1,858,359	-				-1.0
1,858,408	-		CCNA_01730	0.10	-1.3
1,858,517	+		CCNA_01730	0.17	-0.8
1,858,535	-		CCNA_01730	0.18	-2.3
1,858,537	+		CCNA_01730	0.19	+1.8
1,858,548	-		CCNA_01730	0.19	-0.4
1,858,566	+		CCNA_01730	0.21	-0.7
1,858,609	+		CCNA_01730	0.23	-2.2
1,858,729	-		CCNA_01730	0.31	+0.5
1,858,731	-		CCNA_01730	0.32	+1.0
1,858,744	-		CCNA_01730	0.32	-1.4
1,858,744	-		CCNA_01730	0.32	+0.5
1,858,804	+		CCNA_01730	0.36	+0.5
1,858,812	-		CCNA_01730	0.37	-1.0
1,858,883	+		CCNA_01730	0.42	-1.8
1,858,892	-		CCNA_01730	0.42	-0.6
1,858,938	+		CCNA_01730	0.45	-0.5
1,858,990	+		CCNA_01730	0.49	-1.1
1,858,998	-		CCNA_01730	0.49	+0.8
1,859,012	-		CCNA_01730	0.50	-0.3
1,859,104	-		CCNA_01730	0.56	-0.2
1,859,251	+		CCNA_01730	0.66	-2.1
1,859,290	+		CCNA_01730	0.69	-0.7
1,859,306	-		CCNA_01730	0.70	+1.0
1,859,338	+		CCNA_01730	0.72	+0.1
1,859,348	+		CCNA_01730	0.73	-0.4
1,859,356	-		CCNA_01730	0.73	-1.0
1,859,358	-		CCNA_01730	0.73	+0.5
1,859,358	-		CCNA_01730	0.73	-1.5
1,859,361	+		CCNA_01730	0.73	-0.8
1,859,406	-		CCNA_01730	0.76	-2.8
1,859,406	-		CCNA_01730	0.76	-1.3
1,859,504	+		CCNA_01730	0.83	-0.1
1,859,509	+		CCNA_01730	0.83	+0.6
1,859,514	+		CCNA_01730	0.84	-1.9
1,859,544	-		CCNA_01730	0.86	+0.5
1,859,549	-		CCNA_01730	0.86	+0.7
1,859,551	+		CCNA_01730	0.86	-0.8
1,859,559	-		CCNA_01730	0.87	+0.1
1,859,576	-		CCNA_01730	0.88	-2.7
1,859,604	+		CCNA_01730	0.90	-0.3
1,859,604	+		CCNA_01730	0.90	-1.6
1,859,707	-				-2.8
1,859,785	-				-3.0
1,859,852	+		CCNA_01731	0.16	-0.2
1,859,860	-		CCNA_01731	0.17	+1.0
1,859,860	-		CCNA_01731	0.17	+0.1
1,859,860	-		CCNA_01731	0.17	+1.2
1,859,906	-		CCNA_01731	0.24	-1.9
1,859,939	-		CCNA_01731	0.30	+0.5
1,859,976	-		CCNA_01731	0.36	+1.7
1,859,990	+		CCNA_01731	0.38	-0.5
1,859,998	-		CCNA_01731	0.39	+0.9
1,859,998	-		CCNA_01731	0.39	+2.4
1,860,053	-		CCNA_01731	0.48	-2.8
1,860,197	+		CCNA_01731	0.71	+1.8
1,860,234	-		CCNA_01731	0.77	+0.8
1,860,239	-		CCNA_01731	0.78	-2.1
1,860,288	-		CCNA_01731	0.86	-0.8
1,860,333	-				-0.6
1,860,373	+				-1.1
1,860,380	-				+0.5
1,860,381	-				-1.2
1,860,390	-				+1.7
1,860,418	+				+1.1
1,860,458	+				-0.3
1,860,493	+				-2.5
1,860,539	-		CCNA_01732	0.12	-1.3
1,860,589	+		CCNA_01732	0.16	-1.7
1,860,589	+		CCNA_01732	0.16	-0.8
1,860,592	-		CCNA_01732	0.16	+1.8
1,860,597	-		CCNA_01732	0.16	-3.0
1,860,622	+		CCNA_01732	0.18	-0.2
1,860,622	+		CCNA_01732	0.18	+1.4
1,860,719	-		CCNA_01732	0.25	-1.8
1,860,740	+		CCNA_01732	0.27	+0.6